RNA–Protein interactions for RNA: ENST00000580991.1

IFT20-211, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-211ENST00000580991 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 KRT87PA6NCN2 255 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 NDC80O14777 642 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 CDC40O60508 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
IFT20-211ENST00000580991 RBP3P10745 1247 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 TFEBP19484 476 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 BDKRB1P46663 353 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 CKAP4Q07065 602 aaKnown RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 ZNF468Q5VIY5 522 aaPredicted RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 DARS2Q6PI48 645 aaKnown RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 AFTPHQ6ULP2 937 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 CAMKMTQ7Z624 323 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 PAQR7Q86WK9 346 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 RPS19BP1Q86WX3 136 aaKnown RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 ZZZ3Q8IYH5 903 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 RPRMLQ8N4K4 120 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 OR9A4Q8NGU2 314 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 OR51Q1Q8NH59 317 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 FOPNLQ96NB1 174 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 LPAR4Q99677 370 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 CDCP1Q9H5V8 836 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
IFT20-211ENST00000580991 NFS1Q9Y697 457 aa13.8□□□□□ -0.2
IFT20-211ENST00000580991 IGKV1-8A0A0C4DH67 115 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 CTAGE15A4D2H0 777 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 HS6ST1O60243 411 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 GOT2P00505 430 aaKnown RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 TUBBP07437 444 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 CTAGE8P0CG41 777 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 CTNNA2P26232 953 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 ADSLP30566 484 aaPredicted RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 XCR1P46094 333 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 NUP107P57740 925 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 EIF3EP60228 445 aaKnown RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 RELAQ04206 551 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 ACTN3Q08043 901 aaPredicted RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 TCEAL1Q15170 157 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 PARP6Q2NL67 630 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 CMPK2Q5EBM0 449 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 PAPD4Q6PIY7 484 aaKnown RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 CTAGE6Q86UF2 777 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 CTAGE4Q8IX94 777 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 KRT222Q8N1A0 295 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 OR13J1Q8NGT2 312 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 GOT1L1Q8NHS2 421 aaPredicted RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 MCOLN3Q8TDD5 553 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 GPATCH1Q9BRR8 931 aaKnown RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 SLC6A16Q9GZN6 736 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 TRIM45Q9H8W5 580 aaPredicted RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 RASSF1Q9NS23 344 aa13.79□□□□□ -0.2
IFT20-211ENST00000580991 PIH1D1Q9NWS0 290 aaKnown RBP13.79□□□□□ -0.2
IFT20-211ENST00000580991 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.79□□□□□ -0.2
IFT20-211ENST00000580991 OR2W5A6NFC9 320 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 KLRC4-KLRK1H3BQV0 150 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 KPNA5O15131 536 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 P2RX6O15547 441 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ATP8B1O43520 1251 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ZNF189O75820 626 aaPredicted RBP13.78□□□□□ -0.2
IFT20-211ENST00000580991 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
IFT20-211ENST00000580991 INHBBP09529 407 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 RPA3P35244 121 aaPredicted RBP13.78□□□□□ -0.2
IFT20-211ENST00000580991 NSDHLQ15738 373 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 CCDC38Q502W7 563 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 SFT2D3Q587I9 215 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 EMC4Q5J8M3 183 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 TMEM198Q66K66 360 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ZNF425Q6IV72 752 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 SUSD1Q6UWL2 747 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ARSKQ6UWY0 536 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 CLEC9AQ6UXN8 241 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 PCGF5Q86SE9 256 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ZNF227Q86WZ6 799 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 TRIM58Q8NG06 486 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 OR5M3Q8NGP4 307 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 C16orf52Q8NHV5 167 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 SPATA3Q8NHX4 192 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 ARSGQ96EG1 525 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 PANX3Q96QZ0 392 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 PCYOX1Q9UHG3 505 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 RUVBL2Q9Y230 463 aaKnown RBP13.78□□□□□ -0.2
IFT20-211ENST00000580991 PCDHA13Q9Y5I0 950 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 SCN3AQ9NY46 2000 aa13.78□□□□□ -0.2
IFT20-211ENST00000580991 KIAA1324LA8MWY0 1029 aaPredicted RBP13.77□□□□□ -0.21
IFT20-211ENST00000580991 PRMT5O14744 637 aaPredicted RBP13.77□□□□□ -0.21
IFT20-211ENST00000580991 CCNDBP1O95273 360 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 ERGP11308 486 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 TPP2P29144 1249 aaPredicted RBP13.77□□□□□ -0.21
IFT20-211ENST00000580991 HIVEP2P31629 2446 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 TRHRP34981 398 aaPredicted RBP13.77□□□□□ -0.21
IFT20-211ENST00000580991 RFC3P40938 356 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 MARCKSL1P49006 195 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 ITGA8P53708 1063 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 DLX5P56178 289 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 SLC26A5P58743 744 aa13.77□□□□□ -0.21
IFT20-211ENST00000580991 COPS2P61201 443 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms