RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 BRIX1Q8TDN6 353 aaKnown RBP13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 C8orf44Q96CB5 159 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 VN1R1Q9GZP7 353 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 POPDC3Q9HBV1 291 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 ANKHQ9HCJ1 492 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 NSMCE4AQ9NXX6 385 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 MAP10Q9P2G4 905 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
SMARCE1-216ENST00000580419 A0A1B0GUH1 482 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 PABPN1LA6NDY0 278 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 E7ESA3 106 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 WFS1O76024 890 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 GSTM2P28161 218 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 HNMTP50135 292 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 TERF1P54274 439 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 ARG2P78540 354 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 PDAP1Q13442 181 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 NAE1Q13564 534 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 PHKG1Q16816 387 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 CYS1Q717R9 158 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 CPEB2Q7Z5Q1 589 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 CREG2Q8IUH2 290 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 KLHDC8AQ8IYD2 350 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 OR9A4Q8NGU2 314 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 M1APQ8TC57 530 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 SLC13A3Q8WWT9 602 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 LINGO1Q96FE5 620 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 SNF8Q96H20 258 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 NDNQ99608 321 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 ARL15Q9NXU5 204 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 MOCS1Q9NZB8 636 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 ABI3Q9P2A4 366 aa13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 TSR3Q9UJK0 312 aaKnown RBP13.7□□□□□ -0.22
SMARCE1-216ENST00000580419 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ABCA12Q86UK0 2595 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 LRBAP50851 2863 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 SYNDIG1LA6NDD5 238 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 MAGEB17A8MXT2 336 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 SEC31AO94979 1220 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 CRYABP02511 175 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ZNF37AP17032 561 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 XCR1P46094 333 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ARL4CP56559 192 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 PPP1R3AQ16821 1122 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 BBS9Q3SYG4 887 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 CDKL4Q5MAI5 379 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 RBM20Q5T481 1227 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 HECTD2Q5U5R9 776 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ABHD17BQ5VST6 288 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 SBSNQ6UWP8 590 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 LINC00696Q6ZRV3 163 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 IGDCC3Q8IVU1 814 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 PRSS58Q8IYP2 241 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 TRPV3Q8NET8 790 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 OR1N1Q8NGS0 311 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 NT5CQ8TCD5 201 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 NR4A3Q92570 626 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 RELTQ969Z4 430 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ZNF354BQ96LW1 612 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 MESP1Q9BRJ9 268 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 MCMBPQ9BTE3 642 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 YIPF2Q9BWQ6 316 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 PITHD1Q9GZP4 211 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 MMP25Q9NPA2 562 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 OLAHQ9NV23 265 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 COPG2Q9UBF2 871 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 ZFP69BQ9UJL9 534 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 SAR1BQ9Y6B6 198 aa13.69□□□□□ -0.22
SMARCE1-216ENST00000580419 OR5H15A6NDH6 313 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 URADA6NGE7 173 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 TP73O15350 636 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 LCMT2O60294 686 aaKnown RBP13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 GALR3O60755 368 aaPredicted RBP13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 RNF224P0DH78 156 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 JAK1P23458 1154 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 ELK3P41970 407 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 TDGF1P3P51864 188 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 EFNA3P52797 238 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 DR1Q01658 176 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 MGAT5Q09328 741 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 PLD3Q8IV08 490 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 ARMC10Q8N2F6 343 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 BBOF1Q8ND07 529 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 SUN3Q8TAQ9 357 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 OR4K3Q96R72 315 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 PHACTR1Q9C0D0 580 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 ATG10Q9H0Y0 220 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 PELI2Q9HAT8 420 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 LANCL2Q9NS86 450 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 PTGFRNQ9P2B2 879 aa13.68□□□□□ -0.22
SMARCE1-216ENST00000580419 PRAMEF2O60811 474 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ITGAMP11215 1152 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 CDH1P12830 882 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 ALOX12P18054 663 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 SCTRP47872 440 aa13.67□□□□□ -0.22
SMARCE1-216ENST00000580419 RHAGQ02094 409 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms