RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RPS17P08708 135 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 LTA4HP09960 611 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 DHRS4L1P0CG22 281 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CDK4P11802 303 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CCL4P13236 92 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 HGFP14210 728 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 NELFEP18615 380 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 POLR2CP19387 275 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ITIH1P19827 911 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ITGAXP20702 1163 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MAGP20916 626 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SAT1P21673 171 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MPSTP25325 297 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TYK2P29597 1187 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 OAS2P29728 719 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ALDH4A1P30038 563 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 GRIA3P42263 894 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MSH2P43246 934 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MAPK9P45984 424 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RGS4P49798 205 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 AGTR2P50052 363 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PNLIPRP1P54315 467 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SLURP1P55000 103 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 INHBCP55103 352 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 AP1S2P56377 157 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RELAQ04206 551 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TARDBPQ13148 414 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 HNRNPA0Q13151 305 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TRA2AQ13595 282 aaKnown RBP eCLIP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SPIDRQ14159 915 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CASP8Q14790 479 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 KIR2DS3Q14952 304 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PCLAFQ15004 111 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ACAP2Q15057 778 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PTCHD3Q3KNS1 767 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 AMZ1Q400G9 498 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TTMPQ5BVD1 217 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 FBXO48Q5FWF7 155 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ICE2Q659A1 982 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ADNP2Q6IQ32 1131 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 AGTRAPQ6RW13 159 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SUSD1Q6UWL2 747 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 LCTLQ6UWM7 567 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 LRIG3Q6UXM1 1119 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF517Q6ZMY9 492 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RBM44Q6ZP01 1051 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 FAM92BQ6ZTR7 304 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 VN1R4Q7Z5H5 301 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ADAMTSL2Q86TH1 951 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 EXOC3L1Q86VI1 746 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 LCA5Q86VQ0 697 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 OOSP2Q86WS3 158 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TRIM48Q8IWZ4 208 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MYO1HQ8N1T3 1032 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 DNAJC22Q8N4W6 341 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 C2orf73Q8N5S3 287 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RCBTB1Q8NDN9 531 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ABHD11Q8NFV4 315 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 OR10G6Q8NH81 332 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CFAP61Q8NHU2 1237 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 GABPB2Q8TAK5 448 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PIWIL2Q8TC59 973 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 LCN9Q8WX39 176 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ESAMQ96AP7 390 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF501Q96CX3 271 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MOCOSQ96EN8 888 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TSPAN17Q96FV3 270 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PGM2Q96G03 612 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC138Q96M89 665 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TGM7Q96PF1 710 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 GFM1Q96RP9 751 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MIPEPQ99797 713 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 DPYSL5Q9BPU6 564 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SARGQ9BW04 601 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SCNM1Q9BWG6 230 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 RAB11FIP5Q9BXF6 653 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 KRTAP3-1Q9BYR8 98 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ROPN1BQ9BZX4 212 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC68Q9H2F9 335 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 SRMSQ9H3Y6 488 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ALG9Q9H6U8 611 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ROPN1Q9HAT0 212 aaPredicted RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 APMAPQ9HDC9 416 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 HRASLS2Q9NWW9 162 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 OCIAD1Q9NX40 245 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 UTP6Q9NYH9 597 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 XPR1Q9UBH6 696 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 DKK4Q9UBT3 224 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TBK1Q9UHD2 729 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF225Q9UK10 706 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ACSL6Q9UKU0 697 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 GRID1Q9ULK0 1009 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 CLCA2Q9UQC9 943 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL20Q9Y2M5 609 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 TDRKHQ9Y2W6 561 aaKnown RBP3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 ACOT9Q9Y305 439 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 MSRB2Q9Y3D2 182 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PCDHGA8Q9Y5G5 932 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 PCDHGA3Q9Y5H0 932 aa3.63□□□□□ -1.83
SMARCE1-215ENST00000578995 COLEC10Q9Y6Z7 277 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms