RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 RHDQ02161 417 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 RBBP5Q15291 538 aaKnown RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HKDC1Q2TB90 917 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 XKR6Q5GH73 641 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ARHGAP40Q5TG30 622 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 C1orf189Q5VU69 101 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TMEM214Q6NUQ4 689 aaKnown RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MRPL14Q6P1L8 145 aaKnown RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 OVCH1Q7RTY7 1134 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLC22A9Q8IVM8 553 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ARHGEF39Q8N4T4 335 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PTGR2Q8N8N7 351 aaPredicted RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 STARD8Q92502 1023 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CCDC126Q96EE4 140 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 C10orf90Q96M02 699 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DRC3Q9H069 523 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 WDR54Q9H977 334 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CLK4Q9HAZ1 481 aaKnown RBP13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TMEM216Q9P0N5 145 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ADGRE2Q9UHX3 823 aa13.23□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ANKDD1BA6NHY2 528 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SMIM23A6NLE4 172 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GOLGA8RI6L899 631 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NSA2O95478 260 aaKnown RBP13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ITGB2P05107 769 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SERPINB1P30740 379 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HNF4AP41235 474 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 AVPR1BP47901 424 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NFKB2Q00653 900 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MEF2AQ02078 507 aaPredicted RBP13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLC18A2Q05940 514 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CHIT1Q13231 466 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GTF2H2Q13888 395 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DOC2AQ14183 400 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 HERC3Q15034 1050 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CCDC153Q494R4 210 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 FBXO48Q5FWF7 155 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 LIPJQ5W064 366 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 LCN10Q6JVE6 187 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 GTF2H2CQ6P1K8 395 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CYP4X1Q8N118 509 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TEX9Q8N6V9 391 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ENDOVQ8N8Q3 282 aaKnown RBP13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ZNF740Q8NDX6 193 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 RNF31Q96EP0 1072 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MAGEB10Q96LZ2 347 aaPredicted RBP13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 C1QTNF3Q9BXJ4 246 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 RHBGQ9H310 441 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ACTL8Q9H568 366 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SYNPO2LQ9H987 977 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TCFL5Q9UL49 500 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PLAAQ9Y263 795 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TSC22D4Q9Y3Q8 395 aa13.22□□□□□ -0.29
SNORD3B-1-201ENST00000577988 IGLV3-12A0A075B6K2 115 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 TK2O00142 265 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 E2F3O00716 465 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 P2RX6O15547 441 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 FOXS1O43638 330 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 CLEC3AO75596 197 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SBK3P0C264 359 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 EPORP19235 508 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ITGAXP20702 1163 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ATP5F1P24539 256 aaPredicted RBP13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 VARSP26640 1264 aaKnown RBP13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 STXBP1P61764 594 aaKnown RBP13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 OCA2Q04671 838 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 DSG2Q14126 1118 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLBPQ14493 270 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SSPNQ14714 243 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 UGT8Q16880 541 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ANKRD53Q8N9V6 530 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 OR2Y1Q8NGV0 311 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 OR2W6PQ8NHA6 318 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 COL26A1Q96A83 441 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PHF21BQ96EK2 531 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 WBP1Q96G27 269 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 NTMT1Q9BV86 223 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLC6A16Q9GZN6 736 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SPNS1Q9H2V7 528 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ANKHQ9HCJ1 492 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SLC22A11Q9NSA0 550 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MKS1Q9NXB0 559 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 SENP1Q9P0U3 644 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MID2Q9UJV3 735 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 LHX6Q9UPM6 363 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 MAP4K5Q9Y4K4 846 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 ASB1Q9Y576 335 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 PCDHGA11Q9Y5H2 935 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 WDFY3Q8IZQ1 3526 aa13.21□□□□□ -0.29
SNORD3B-1-201ENST00000577988 VSTM2BA6NLU5 285 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 A8MT66 165 aa13.2□□□□□ -0.3
SNORD3B-1-201ENST00000577988 COPEO14579 308 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms