RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 TTC30BQ8N4P2 665 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 AVL9Q8NBF6 648 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 SUMF1Q8NBK3 374 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 TEKT4Q8WW24 435 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 SEPT1Q8WYJ6 367 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 PROX1Q92786 737 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 LINC00615Q96LM1 132 aaPredicted RBP1.88□□□□□ -2.11
TOP2A-202ENST00000577541 CFAP57Q96MR6 1250 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF577Q9BSK1 485 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 CHCHD5Q9BSY4 110 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 PRRG4Q9BZD6 226 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 ANKRD2Q9GZV1 360 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 TBC1D13Q9NVG8 400 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF581Q9P0T4 197 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 C5AR2Q9P296 337 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 TXNDC16Q9P2K2 825 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 GIMAP2Q9UG22 337 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 RPS6KA6Q9UK32 745 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 PILRBQ9UKJ0 227 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 RNF150Q9ULK6 438 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 FAM169AQ9Y6X4 670 aa1.88□□□□□ -2.11
TOP2A-202ENST00000577541 TRBC2A0A5B9 178 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF840PA6NDX5 716 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 SHISA9B4DS77 424 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CCL24O00175 119 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 PHOX2AO14813 284 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 AP5Z1O43299 807 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ECE2O60344 883 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 GALR3O60755 368 aaPredicted RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CYTIPO60759 359 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 PSMD10O75832 226 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 SLCO2B1O94956 709 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 POP4O95707 220 aaKnown RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 FYNP06241 537 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 PCP11498 1178 aaKnown RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 GLULP15104 373 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 KRT20P35900 424 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 LBX1P52954 281 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 DHODHQ02127 395 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 FCHO2Q0JRZ9 810 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ILF2Q12905 390 aaKnown RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CAPRIN1Q14444 709 aaKnown RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 BMP2KLQ5H9B9 411 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ARMC4Q5T2S8 1044 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 PLPPR4Q7Z2D5 763 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CEACAM19Q7Z692 300 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 SLC25A42Q86VD7 318 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CARM1Q86X55 608 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 TICAM2Q86XR7 235 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 RNF130Q86XS8 419 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 HSCBQ8IWL3 235 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 LRTM2Q8N967 370 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 POGLUT1Q8NBL1 392 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 SSC4DQ8WTU2 575 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 METTL21AQ8WXB1 218 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ROBO4Q8WZ75 1007 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 CASP10Q92851 521 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF597Q96LX8 424 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 BTBD9Q96Q07 612 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 OCR1Q9BZK8 76 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 KLHL4Q9C0H6 718 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF107Q9UII5 783 aaPredicted RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 MRPS18CQ9Y3D5 142 aaKnown RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 TRPV2Q9Y5S1 764 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 MAGED1Q9Y5V3 778 aaPredicted RBP1.87□□□□□ -2.11
TOP2A-202ENST00000577541 KIF25-AS1Q9Y6Z4 181 aa1.87□□□□□ -2.11
TOP2A-202ENST00000577541 A0A087WWV3 80 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 A0A087WZ39 114 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 IQCMA0A1B0GVH7 501 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ARHGEF33A8MVX0 844 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 CCDC188H7C350 402 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 PLOD3O60568 738 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ZNF354AO60765 605 aaPredicted RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 SAP30O75446 220 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 MTRF1O75570 445 aaKnown RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 RPS6KA5O75582 802 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ACSL3O95573 720 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 GSRP00390 522 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 YES1P07947 543 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 GP9P14770 177 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 PKLRP30613 574 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 CLCN4P51793 760 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 CSE1LP55060 971 aaKnown RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 NUCB1Q02818 461 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 CACNG1Q06432 222 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ACSM1Q08AH1 577 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 KIAA0141Q14154 515 aaPredicted RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 FAM189A2Q15884 450 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 PTGISQ16647 500 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 FAM174BQ3ZCQ3 159 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 FAM106AQ4KMX7 169 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 PRR30Q53SZ7 412 aaPredicted RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 C9orf152Q5JTZ5 239 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ERMARDQ5T6L9 678 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 ATP1A1-AS1Q5TC04 95 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 RNLSQ5VYX0 342 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 NAA16Q6N069 864 aaPredicted RBP1.86□□□□□ -2.11
TOP2A-202ENST00000577541 POMGNT2Q8NAT1 580 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 KCTD6Q8NC69 237 aa1.86□□□□□ -2.11
TOP2A-202ENST00000577541 TYMSOSQ8TAI1 123 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms