RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 FAM53BQ14153 422 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 ERV3-1Q14264 604 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 SLBPQ14493 270 aaKnown RBP eCLIP14.48□□□□□ -0.09
LITAF-217ENST00000575426 SLC9A5Q14940 896 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 NCF4Q15080 339 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 PCBP2Q15366 365 aaKnown RBP eCLIP14.48□□□□□ -0.09
LITAF-217ENST00000575426 CRTC2Q53ET0 693 aaPredicted RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 FAM198BQ6UWH4 519 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 OVCH1Q7RTY7 1134 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 VN1R4Q7Z5H5 301 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 SYVN1Q86TM6 617 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 CYP4X1Q8N118 509 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 METTL27Q8N6F8 245 aaPredicted RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 PTGR2Q8N8N7 351 aaPredicted RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 MZB1Q8WU39 189 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 SNRNP27Q8WVK2 155 aaKnown RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 ATP6V1E2Q96A05 226 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 MMABQ96EY8 250 aaPredicted RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 C10orf90Q96M02 699 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 CATSPER2Q96P56 530 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 RUFY1Q96T51 708 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 DRC3Q9H069 523 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 SPNS1Q9H2V7 528 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 NT5DC2Q9H857 520 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 SYNPO2LQ9H987 977 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 GEMIN8Q9NWZ8 242 aaKnown RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 TMEM216Q9P0N5 145 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 TCFL5Q9UL49 500 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 MAU2Q9Y6X3 613 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 ZZEF1O43149 2961 aa14.48□□□□□ -0.09
LITAF-217ENST00000575426 KMT2BQ9UMN6 2715 aaPredicted RBP14.48□□□□□ -0.09
LITAF-217ENST00000575426 TK2O00142 265 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 COPEO14579 308 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 NKX2-8O15522 239 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 NDUFS4O43181 175 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 ALBP02768 609 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 FBLP22087 321 aaKnown RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 GSTM2P28161 218 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 EEF1DP29692 281 aaKnown RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 ARL1P40616 181 aaPredicted RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 FOLR3P41439 243 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 RPS18P62269 152 aaKnown RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 SKP1P63208 163 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 OCA2Q04671 838 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 CDC20Q12834 499 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 GTF2H2Q13888 395 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 DOC2AQ14183 400 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 GTF2H2CQ6P1K8 395 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 CCT6BQ92526 530 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 UBE2E3Q969T4 207 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 FKBP10Q96AY3 582 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 MACROD1Q9BQ69 325 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 ANKHQ9HCJ1 492 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 GRID1Q9ULK0 1009 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 PTRH2Q9Y3E5 179 aaKnown RBP14.47□□□□□ -0.09
LITAF-217ENST00000575426 ASB1Q9Y576 335 aa14.47□□□□□ -0.09
LITAF-217ENST00000575426 A0A0A6YYC8 382 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 CDC14CA4D256 554 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 I3L1I5 382 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 SIX3O95343 332 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 MED26O95402 600 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 ONECUT2O95948 504 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 CAPN1P07384 714 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 KRT4P19013 534 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 HPDP32754 393 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 CASP2P42575 452 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 CYP4F2P78329 520 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 RHDQ02161 417 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 TBCCQ15814 346 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 CCDC153Q494R4 210 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 TMEM214Q6NUQ4 689 aaKnown RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 NIPAL1Q6NVV3 410 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 ABHD13Q7L211 337 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 GOLGA7Q7Z5G4 137 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 MYLK4Q86YV6 388 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 ANKRD53Q8N9V6 530 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 KCT2Q8NC54 265 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 ZCCHC10Q8TBK6 192 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 NT5CQ8TCD5 201 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 PPP4R1Q8TF05 950 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 WDR34Q96EX3 536 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 SEC16BQ96JE7 1060 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 IQCGQ9H095 443 aaKnown RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 IPPKQ9H8X2 491 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 ACTR8Q9H981 624 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 ZNF282Q9UDV7 671 aaPredicted RBP14.46□□□□□ -0.09
LITAF-217ENST00000575426 SLC22A7Q9Y694 548 aa14.46□□□□□ -0.09
LITAF-217ENST00000575426 LRRC14BA6NHZ5 514 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 FOXO6A8MYZ6 492 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 NSA2O95478 260 aaKnown RBP14.45□□□□□ -0.1
LITAF-217ENST00000575426 SERPINA6P08185 405 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 ATP5F1P24539 256 aaPredicted RBP14.45□□□□□ -0.1
LITAF-217ENST00000575426 CRHR1P34998 444 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 HNF4AP41235 474 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 STXBP1P61764 594 aaKnown RBP14.45□□□□□ -0.1
LITAF-217ENST00000575426 SSPNQ14714 243 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 HERC3Q15034 1050 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 KRT71Q3SY84 523 aa14.45□□□□□ -0.1
LITAF-217ENST00000575426 LIPJQ5W064 366 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms