RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 C8GP07360 202 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 HIST1H2AGP0C0S8 130 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 HIST1H2ADP20671 130 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 ITGAXP20702 1163 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CASQ1P31415 396 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 OR1D4P47884 311 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PGDP52209 483 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CDKN2DP55273 166 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 ARF3P61204 181 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 ABATP80404 500 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 RELAQ04206 551 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PDIA2Q13087 525 aaKnown RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 ATP1A4Q13733 1029 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 FXNQ16595 210 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 NKG7Q16617 165 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 COLEC12Q5KU26 742 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 RBM20Q5T481 1227 aaKnown RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 THEMIS2Q5TEJ8 643 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 TRMT10BQ6PF06 316 aaKnown RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 RNF44Q7L0R7 432 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PIWIL4Q7Z3Z4 852 aaKnown RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 GALNT7Q86SF2 657 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CNTN4Q8IWV2 1026 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 LRRC56Q8IYG6 542 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 BBOF1Q8ND07 529 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 FDCSPQ8NFU4 85 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 FKBP10Q96AY3 582 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 NACC2Q96BF6 587 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 WDR89Q96FK6 387 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 HIST1H2AHQ96KK5 128 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CCDC138Q96M89 665 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 HIST1H2AJQ99878 128 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PLCD4Q9BRC7 762 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 H2AFJQ9BTM1 129 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 EPN3Q9H201 632 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 SLC26A1Q9H2B4 701 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PIF1Q9H611 641 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CLMPQ9H6B4 373 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PARVBQ9HBI1 364 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PLAC1Q9HBJ0 212 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 ZNF304Q9HCX3 659 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 SLC6A20Q9NP91 592 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 TMEM184CQ9NVA4 438 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 STOX2Q9P2F5 926 aaPredicted RBP7.09□□□□□ -1.27
NUP88-205ENST00000572809 ADAMTS6Q9UKP5 1117 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CDC14AQ9UNH5 594 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 CHMP2BQ9UQN3 213 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PDE10AQ9Y233 779 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 VWA7Q9Y334 891 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 SNX24Q9Y343 169 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 ZNF451Q9Y4E5 1061 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 PCM1Q15154 2024 aa7.09□□□□□ -1.27
NUP88-205ENST00000572809 SNRNP200O75643 2136 aaKnown RBP7.09□□□□□ -1.28
NUP88-205ENST00000572809 IGKV1-8A0A0C4DH67 115 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MEGF11A6BM72 1044 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 H7BY64 318 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 AGPSO00116 658 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 TXNDC9O14530 226 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 FANCGO15287 622 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 TP73O15350 636 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 SLC16A5O15375 505 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 KLHL41O60662 606 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ADAM11O75078 769 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MED26O95402 600 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 UMODP07911 640 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 EZRP15311 586 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 HRH2P25021 359 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 IMPA1P29218 277 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 RPL21P46778 160 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 FOXL2P58012 376 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 IL2P60568 153 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MRPS25P82663 173 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 OCA2Q04671 838 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 FRG1Q14331 258 aaKnown RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 IGFBP7Q16270 282 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MUM1Q2TAK8 710 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 DCAF10Q5QP82 559 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 HECTD2Q5U5R9 776 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 STEAP4Q687X5 459 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ZNF425Q6IV72 752 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 FAM45BPQ6NSW5 357 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 PRMT9Q6P2P2 845 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 AGTRAPQ6RW13 159 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 COX15Q7KZN9 410 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MAATS1Q7Z4T9 603 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 ADCK2Q7Z695 626 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MRGPREQ86SM8 312 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 PAQR7Q86WK9 346 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 LSRQ86X29 649 aaPredicted RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 HPS6Q86YV9 775 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 TMEM151BQ8IW70 566 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 MYO1HQ8N1T3 1032 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 METTL27Q8N6F8 245 aaPredicted RBP7.08□□□□□ -1.28
NUP88-205ENST00000572809 FAM169BQ8N8A8 192 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 GPATCH11Q8N954 259 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 CLEC1AQ8NC01 280 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 FBXO36Q8NEA4 188 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 SPATA4Q8NEY3 305 aa7.08□□□□□ -1.28
NUP88-205ENST00000572809 FAM45AQ8TCE6 357 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms