RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 OR56A3Q8NH54 315 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 ACMSDQ8TDX5 336 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 C19orf60Q96EN9 201 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 PRAP1Q96NZ9 151 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 FCRL4Q96PJ5 515 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 RUFY1Q96T51 708 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 TMEM79Q9BSE2 394 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 C12orf65Q9H3J6 166 aaKnown RBP12.72□□□□□ -0.37
CCDC40-205ENST00000571028 PRM3Q9NNZ6 103 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 FGF21Q9NSA1 209 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 EURLQ9NYK6 297 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 GPR83Q9NYM4 423 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 ENTPD4Q9Y227 616 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 DYRK1BQ9Y463 629 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 OTOGQ6ZRI0 2925 aa12.72□□□□□ -0.37
CCDC40-205ENST00000571028 A0A0J9YVX5 310 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 LRRC14BA6NHZ5 514 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 COPEO14579 308 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 HCRTR1O43613 425 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SMIM24O75264 130 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SPAG7O75391 227 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 STK16O75716 305 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 CDH1P12830 882 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 NPPBP16860 134 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 CCND1P24385 295 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 HNMTP50135 292 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 MEF2AQ02078 507 aaPredicted RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 ACY1Q03154 408 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 PRDX1Q06830 199 aaKnown RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 IL10RAQ13651 578 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 CASP8Q14790 479 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 RASA2Q15283 850 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 CATSPEREQ5SY80 951 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 FAM199XQ6PEV8 388 aaPredicted RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 LCTLQ6UWM7 567 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 TRABD2AQ86V40 505 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 CARFQ8N187 725 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 TCAIMQ8N3R3 496 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 PTGR2Q8N8N7 351 aaPredicted RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 RHEBL1Q8TAI7 183 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 MR1Q95460 341 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SNRNP40Q96DI7 357 aaKnown RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 PHF21BQ96EK2 531 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 OR4K3Q96R72 315 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 HAUS8Q9BT25 410 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 TMEM109Q9BVC6 243 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SGPP1Q9BX95 441 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 PCBD2Q9H0N5 130 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 MRPL46Q9H2W6 279 aaKnown RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 FANCEQ9HB96 536 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 ASF1BQ9NVP2 202 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SEMA5BQ9P283 1151 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 DCDC2Q9UHG0 476 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 LGALS13Q9UHV8 139 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 PTBP2Q9UKA9 531 aaKnown RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 SNX7Q9UNH6 387 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 FARSAQ9Y285 508 aaKnown RBP12.71□□□□□ -0.37
CCDC40-205ENST00000571028 ASB1Q9Y576 335 aa12.71□□□□□ -0.37
CCDC40-205ENST00000571028 MAP2K7O14733 419 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 HAT1O14929 419 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 GLRA3O75311 464 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 STATHP02808 62 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 EIF2S1P05198 315 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 CTSBP07858 339 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 MTHFD2P13995 350 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 TAC1P20366 129 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 CCT5P48643 541 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 ITGA1P56199 1179 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 ABATP80404 500 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 PRAMEF17Q5VTA0 474 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 PWWP2BQ6NUJ5 590 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 LRIG3Q6UXM1 1119 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 TMPRSS11BQ86T26 416 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 MCATQ8IVS2 390 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 CISD2Q8N5K1 135 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 RBMXL3Q8N7X1 1067 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 PDPRQ8NCN5 879 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 NEIL2Q969S2 332 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 MRPL57Q9BQC6 102 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 PLCD4Q9BRC7 762 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 NUDT9Q9BW91 350 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 IQCGQ9H095 443 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 ILKAPQ9H0C8 392 aaPredicted RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 CNOT10Q9H9A5 744 aaKnown RBP12.7□□□□□ -0.38
CCDC40-205ENST00000571028 DNAJC11Q9NVH1 559 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 BTRCQ9Y297 605 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 ANGPTL3Q9Y5C1 460 aa12.7□□□□□ -0.38
CCDC40-205ENST00000571028 PRRC2CQ9Y520 2896 aaKnown RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 UQCRHLA0A096LP55 91 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 IGKV1-8A0A0C4DH67 115 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 FEZF1A0PJY2 475 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CLGNO14967 610 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CTSVO60911 334 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CPNE3O75131 537 aaKnown RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 CEACAM4O75871 244 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 FKBP9O95302 570 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 SIX3O95343 332 aaPredicted RBP12.69□□□□□ -0.38
CCDC40-205ENST00000571028 TIAF1O95411 115 aa12.69□□□□□ -0.38
CCDC40-205ENST00000571028 UQCRHP07919 91 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms