RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 ZIM3Q96PE6 472 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GBP5Q96PP8 586 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 RAB3IPQ96QF0 476 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SH3GL2Q99962 352 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 HGH1Q9BTY7 390 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 IFT27Q9BW83 186 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 FSD1LQ9BXM9 530 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 POLR1EQ9GZS1 481 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SLC25A51Q9H1U9 297 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 LTB4R2Q9NPC1 389 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 GAR1Q9NY12 217 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SEMA5BQ9P283 1151 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 MFHAS1Q9Y4C4 1052 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 SNX10Q9Y5X0 201 aa6.93□□□□□ -1.3
CNOT1-222ENST00000570139 MKI67P46013 3256 aaKnown RBP6.93□□□□□ -1.3
CNOT1-222ENST00000570139 KIF26AQ9ULI4 1882 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MAGEB16A2A368 324 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 VWC2LB2RUY7 222 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 H0YGN5 161 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 KCNK1O00180 336 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 TAF4O00268 1085 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 QSOX1O00391 747 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MPPED1O15442 326 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 KDELR3O43731 214 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 RFPL2O75678 378 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CBX6O95503 412 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 JCHAINP01591 159 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ENO1P06733 434 aaKnown RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 HEXAP06865 529 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 HNRNPCP07910 306 aaKnown RBP eCLIP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ADH4P08319 380 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MYZAPP0CAP1 466 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 NDUFB7P17568 137 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ENGP17813 658 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ITPKBP27987 946 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PSMB4P28070 264 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CDAP32320 146 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 STX2P32856 288 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MAGEA3P43357 314 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 DMWDQ09019 674 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CDH17Q12864 832 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PDIA2Q13087 525 aaKnown RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 SEMA3AQ14563 771 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 DMC1Q14565 340 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF235Q14590 738 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MFSD13AQ14CX5 517 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 E2F5Q15329 346 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 TEAD2Q15562 447 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ZNF77Q15935 545 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 UAP1Q16222 522 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 RPE65Q16518 533 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CES5AQ6NT32 575 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CYS1Q717R9 158 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GET4Q7L5D6 327 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GRASPQ7Z6J2 395 aaPredicted RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GPR149Q86SP6 731 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CEP97Q8IW35 865 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 MFN1Q8IWA4 741 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ZBED8Q8IZ13 594 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 DCAF4L2Q8NA75 395 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 IL17RCQ8NAC3 791 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PYROXD1Q8WU10 500 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 HMCESQ96FZ2 354 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PGM2Q96G03 612 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 HIC2Q96JB3 615 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GDAP1L1Q96MZ0 367 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 SLC22A12Q96S37 553 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 CYP2S1Q96SQ9 504 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 SLC2A11Q9BYW1 496 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 IL22Q9GZX6 179 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 OSGEPL1Q9H4B0 414 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 TRPV4Q9HBA0 871 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PDFQ9HBH1 243 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PFDN4Q9NQP4 134 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GKN1Q9NS71 199 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 DECR2Q9NUI1 292 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 SMPD4Q9NXE4 827 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 BFARQ9NZS9 450 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 C5AR2Q9P296 337 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 ACAD8Q9UKU7 415 aa6.92□□□□□ -1.3
CNOT1-222ENST00000570139 PTRH2Q9Y3E5 179 aaKnown RBP6.92□□□□□ -1.3
CNOT1-222ENST00000570139 GOLGA6L7A0A1B0GV03 622 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TRIM64A6NGJ6 449 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TRIM64BA6NI03 449 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 UNC119BA6NIH7 251 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TMEM200CA6NKL6 621 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SDR42E2A6NKP2 422 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TRDMT1O14717 391 aaKnown RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 HS6ST1O60243 411 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TBL1XO60907 577 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 FAM20BO75063 409 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 CDH16O75309 829 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 MOSPD3O75425 235 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 SLC25A12O75746 678 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 TGDSO95455 350 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 NFATC1O95644 943 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PEX11BO96011 259 aa6.91□□□□□ -1.3
CNOT1-222ENST00000570139 PENKP01210 267 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-222ENST00000570139 RFPL3SP0C7P2 107 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms