RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	PTX3	P26022	381 aa	Predicted RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	MLLT3	P42568	568 aa	Predicted RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	RPS13	P62277	151 aa	Known RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	TRA2A	Q13595	282 aa	Known RBP eCLIP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	PWP1	Q13610	501 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	DDX39B	Q13838	428 aa	Known RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	SMU1	Q2TAY7	513 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	VWA5B1	Q5TIE3	1220 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	SCIMP	Q6UWF3	145 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	ZNF574	Q6ZN55	896 aa	Predicted RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086		Q6ZSR9	355 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	VN1R5	Q7Z5H4	357 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	PLD3	Q8IV08	490 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	DNAJC22	Q8N4W6	341 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	ZNF655	Q8N720	491 aa	Predicted RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	CEP70	Q8NHQ1	597 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	NETO1	Q8TDF5	533 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	RERG	Q96A58	199 aa	Predicted RBP	15.06	■□□□□ 0
CMC2-222	ENST00000570086	TUBGCP3	Q96CW5	907 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	CMTM7	Q96FZ5	175 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	SLC41A2	Q96JW4	573 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	PPP3R2	Q96LZ3	170 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	C3orf30	Q96M34	536 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	EBF4	Q9BQW3	602 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	MS4A8	Q9BY19	250 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	ACPT	Q9BZG2	426 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	SYNDIG1	Q9H7V2	258 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	TCF7L2	Q9NQB0	619 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	SOHLH2	Q9NX45	425 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	VPS29	Q9UBQ0	182 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	KLHL3	Q9UH77	587 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	ARL2BP	Q9Y2Y0	163 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086	PTGDR2	Q9Y5Y4	395 aa		15.06	■□□□□ 0
CMC2-222	ENST00000570086		A0A0J9YVX5	310 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	IGHV5-10-1	A0A0J9YXX1	117 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	SRPX2	O60687	465 aa	Predicted RBP	15.05	■□□□□ -0
CMC2-222	ENST00000570086	SEMA3D	O95025	777 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	SERPINA6	P08185	405 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	PRR35	P0CG20	571 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	NELFE	P18615	380 aa	Known RBP	15.05	■□□□□ -0
CMC2-222	ENST00000570086	EPHA3	P29320	983 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ARL4D	P49703	201 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ARFIP1	P53367	373 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	RGS1	Q08116	209 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CYP4F3	Q08477	520 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CUL3	Q13618	768 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	NR6A1	Q15406	480 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ATP6AP1L	Q52LC2	224 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	MANEA	Q5SRI9	462 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	TMTC4	Q5T4D3	741 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ADNP2	Q6IQ32	1131 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	OGFOD2	Q6N063	350 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CHSY3	Q70JA7	882 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	LARP4	Q71RC2	724 aa	Known RBP eCLIP	15.05	■□□□□ -0	1e-6	■■■■■ 28.8
CMC2-222	ENST00000570086	TMPRSS9	Q7Z410	1059 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ARHGAP22	Q7Z5H3	698 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	ASPG	Q86U10	573 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	SLITRK4	Q8IW52	837 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	D2HGDH	Q8N465	521 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CAMKV	Q8NCB2	501 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	OR2T11	Q8NH01	316 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	NT5C	Q8TCD5	201 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CREB3L4	Q8TEY5	395 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	TM4SF19	Q96DZ7	209 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	PPP1R36	Q96LQ0	422 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	HBEGF	Q99075	208 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	CENPK	Q9BS16	269 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	WDR55	Q9H6Y2	383 aa	Predicted RBP	15.05	■□□□□ -0
CMC2-222	ENST00000570086	AKTIP	Q9H8T0	292 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	PRM3	Q9NNZ6	103 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	FAM60A	Q9NP50	221 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	PLCL2	Q9UPR0	1127 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	FAM186A	A6NE01	2351 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	MYO15A	Q9UKN7	3530 aa		15.05	■□□□□ -0
CMC2-222	ENST00000570086	GOLGA8Q	A0A0J9YX86	632 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	ATP6AP2	A0A1C7CYW4	349 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	GOLGA8O	A6NCC3	632 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	GOLGA8N	F8WBI6	632 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	TXNDC9	O14530	226 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	LSM1	O15116	133 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	PRAMEF10	O60809	474 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	ATP6AP2	O75787	350 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	SLC35G6	P0C7Q6	338 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	LBP	P18428	481 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	CSRP1	P21291	193 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	GABRA4	P48169	554 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	CYP4F2	P78329	520 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	IRX1	P78414	480 aa	Predicted RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	TRIP6	Q15654	476 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	LSM12	Q3MHD2	195 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	TMEM35A	Q53FP2	167 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	SNAP47	Q5SQN1	464 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	KHDRBS2	Q5VWX1	349 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	METTL21C	Q5VZV1	264 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	VN1R4	Q7Z5H5	301 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	ZFAND4	Q86XD8	727 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	MCAT	Q8IVS2	390 aa	Known RBP	15.04	■□□□□ -0
CMC2-222	ENST00000570086	PARP9	Q8IXQ6	854 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	ANKS4B	Q8N8V4	417 aa		15.04	■□□□□ -0
CMC2-222	ENST00000570086	CCDC197	Q8NCU1	140 aa		15.04	■□□□□ -0

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms