RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 DNAJB5O75953 348 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 KRT38O76015 456 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 KLHL2O95198 593 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 NSA2O95478 260 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ALDOAP04075 364 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ABHD2P08910 425 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ZGLP1P0C6A0 271 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MMP11P24347 488 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CXCR2P25025 360 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CNTFP26441 200 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 SCTRP47872 440 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 HSPA7P48741 367 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CCL11P51671 97 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 REEP5Q00765 189 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 NFATC3Q12968 1075 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CDC16Q13042 620 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CHAF1BQ13112 559 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ACAP2Q15057 778 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 VWA2Q5GFL6 755 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CPZQ66K79 652 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 TCTN3Q6NUS6 607 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MRGPREQ86SM8 312 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 TMEM151BQ8IW70 566 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 AMER3Q8N944 861 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 KCT2Q8NC54 265 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF740Q8NDX6 193 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 KCTD4Q8WVF5 259 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 EXT2Q93063 718 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 FER1L6-AS2Q96M78 137 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 SPNS1Q9H2V7 528 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MKKSQ9NPJ1 570 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF71Q9NQZ8 489 aaPredicted RBP13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 SEMA3GQ9NS98 782 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 DNAJC11Q9NVH1 559 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 P4HTMQ9NXG6 502 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 NUDT4Q9NZJ9 180 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 TRPC4Q9UBN4 977 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MRPS2Q9Y399 296 aaKnown RBP13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
HERPUD1-218ENST00000569569 CFAP46Q8IYW2 2715 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 EXOC1LA0A1B0GW35 172 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 SYCE1LA8MT33 242 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 AGPSO00116 658 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 CLGNO14967 610 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 NDUFS4O43181 175 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 RIPK2O43353 540 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 IRF9Q00978 393 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 KLC1Q07866 573 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 RGS1Q08116 209 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 RBBP5Q15291 538 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 LACTB2Q53H82 288 aaPredicted RBP13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 FBXO48Q5FWF7 155 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 TEX35Q5T0J7 233 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 LGSNQ5TDP6 509 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 ATG9BQ674R7 924 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 KLC3Q6P597 504 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 SLCO4C1Q6ZQN7 724 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 SHISA6Q6ZSJ9 500 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 PPP1R32Q7Z5V6 425 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 TRPV3Q8NET8 790 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 OR9A4Q8NGU2 314 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 DCAKDQ8WVC6 231 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 ISL2Q96A47 359 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 ESAMQ96AP7 390 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 CD244Q9BZW8 370 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 VPS11Q9H270 941 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 ANKHQ9HCJ1 492 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 C14orf105Q9NVL8 296 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 PCDHGA9Q9Y5G4 932 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
HERPUD1-218ENST00000569569 URADA6NGE7 173 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SUPT3HB4E1H0 165 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 UBXN8O00124 270 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 MAP2K7O14733 419 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF500O60304 480 aaPredicted RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 CCNT2O60583 730 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SUPT3HO75486 399 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 CEACAM4O75871 244 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SERPIND1P05546 499 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 IL1RNP18510 177 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 VARSP26640 1264 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 MAGEA12P43365 314 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 GLRBP48167 497 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 SNRPNP63162 240 aaKnown RBP13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 HERC3Q15034 1050 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 RBBP7Q16576 425 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 DCAF10Q5QP82 559 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 PRSS41Q7RTY9 318 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 ZNF605Q86T29 641 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 LAPTM4BQ86VI4 370 aa13.1□□□□□ -0.31
HERPUD1-218ENST00000569569 PRSS58Q8IYP2 241 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms