RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 FAM117BQ6P1L5 589 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 DSG4Q86SJ6 1040 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 LRRC28Q86X40 367 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 PGBD3Q8N328 593 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BEND7Q8N7W2 519 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 OR10H5Q8NGA6 315 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FANK1Q8TC84 345 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ELP5Q8TE02 316 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 PHYHIPQ92561 330 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 NTPCRQ9BSD7 190 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 PXMP2Q9NR77 195 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 NLGN3Q9NZ94 848 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 POLHQ9Y253 713 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 MRPS33Q9Y291 106 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 PCDHB5Q9Y5E4 795 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CACNG2Q9Y698 323 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 LCHNA4D1U4 455 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 F5H5P2 479 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CAPN5O15484 640 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 HTR3BO95264 441 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 NTSR2O95665 410 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SPATA31C1P0DKV0 1188 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BCKDHAP12694 445 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TMEM236Q5W0B7 351 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 C3orf67Q6ZVT6 689 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 LIX1Q8N485 282 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ADAMTS15Q8TE58 950 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TSEN15Q8WW01 171 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TRAF4Q9BUZ4 470 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 AIG1Q9NVV5 245 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BCS1LQ9Y276 419 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 N6AMT1Q9Y5N5 214 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GJA3Q9Y6H8 435 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF780BQ9Y6R6 833 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ARNTLO00327 626 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GATCO43716 136 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CILPO75339 1184 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ANXA4P09525 319 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 THEGLP0DJG4 465 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 NCK1P16333 377 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ARHGAP1Q07960 439 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ASAH1Q13510 395 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SCARB2Q14108 478 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GXYLT1Q4G148 440 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CDC42EP5Q6NZY7 148 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 MED27Q6P2C8 311 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 DOK6Q6PKX4 331 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 KCT2Q8NC54 265 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 C3orf58Q8NDZ4 430 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 PIGKQ92643 395 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SIGLEC10Q96LC7 697 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ASB8Q9H765 288 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GORASP2Q9H8Y8 452 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GPRC5CQ9NQ84 441 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ARHGEF4Q9NR80 690 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 A0A0G2JLW4 131 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GXYLT2A0PJZ3 443 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 MEGF11A6BM72 1044 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM86B1E9PN63 330 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CSF3P09919 207 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 TSPAN8P19075 237 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 RBMXP38159 391 aaKnown RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ARF5P84085 180 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 MLLT1Q03111 559 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SYT6Q5T7P8 510 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 COL13A1Q5TAT6 717 aaPredicted RBP6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SLC22A25Q6T423 547 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 FAM180AQ6UWF9 173 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ZBTB2Q8N680 514 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 SEMA6DQ8NFY4 1073 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CD300LFQ8TDQ1 290 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 GNPDA2Q8TDQ7 276 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 RTP4Q96DX8 246 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ELMOD3Q96FG2 381 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 CMTM7Q96FZ5 175 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 APOLD1Q96LR9 279 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 EPYCQ99645 322 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 BRD7Q9NPI1 651 aa6.91□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF670-ZNF695F2Z2N8 137 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
CNOT1-216ENST00000569240 PHYHO14832 338 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 THP07101 528 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 GOT1P17174 413 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 RBMS1P29558 406 aaKnown RBP6.9□□□□□ -1.3
CNOT1-216ENST00000569240 P2RX3P56373 397 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 CAP1Q01518 475 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 SP140Q13342 867 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 PEX6Q13608 980 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 LASP1Q14847 261 aaKnown RBP6.9□□□□□ -1.3
CNOT1-216ENST00000569240 PPM1JQ5JR12 505 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 HLA-DQA1Q5Y7H0 255 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 GLT8D1Q68CQ7 371 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 ENPP7Q6UWV6 458 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 FRRS1Q6ZNA5 592 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 SPPL2BQ8TCT7 592 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 SLC2A14Q8TDB8 520 aa6.9□□□□□ -1.3
CNOT1-216ENST00000569240 TSSK3Q96PN8 268 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms