RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 TSTA3Q13630 321 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 NSDHLQ15738 373 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 ZNF468Q5VIY5 522 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 AADACL2Q6P093 401 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 PRSS41Q7RTY9 318 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 ADCK2Q7Z695 626 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 ZNF227Q86WZ6 799 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 C16orf52Q8NHV5 167 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 SLC35B2Q8TB61 432 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 ELP5Q8TE02 316 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 TMEM125Q96AQ2 219 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 GSX1Q9H4S2 264 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 PLSCR2Q9NRY7 297 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 DNAJB12Q9NXW2 375 aaKnown RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 ST6GALNAC2Q9UJ37 374 aa11.71□□□□□ -0.53
SNX29-207ENST00000568949 RPH3AQ9Y2J0 694 aaPredicted RBP11.71□□□□□ -0.53
SNX29-207ENST00000568949 MAP1AP78559 2803 aaPredicted RBP11.71□□□□□ -0.54
SNX29-207ENST00000568949 MAGEB17A8MXT2 336 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 KLRC4-KLRK1H3BQV0 150 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PRMT3O60678 531 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 CATP04040 527 aaKnown RBP11.7□□□□□ -0.54
SNX29-207ENST00000568949 IL1RNP18510 177 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 TFEBP19484 476 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 HRH2P25021 359 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 FDFT1P37268 417 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 MEOX1P50221 254 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 HLCSP50747 726 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 EIF3BP55884 814 aaKnown RBP11.7□□□□□ -0.54
SNX29-207ENST00000568949 MLF1P58340 268 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 MPP1Q00013 466 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 RHAGQ02094 409 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 ABRAXAS2Q15018 415 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 CMPK2Q5EBM0 449 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 TMEM214Q6NUQ4 689 aaKnown RBP11.7□□□□□ -0.54
SNX29-207ENST00000568949 ARHGAP11AQ6P4F7 1023 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 ACAD11Q709F0 780 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PLD3Q8IV08 490 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 CNGA4Q8IV77 575 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 VSTM4Q8IW00 320 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PPHLN1Q8NEY8 458 aaKnown RBP11.7□□□□□ -0.54
SNX29-207ENST00000568949 MYRIPQ8NFW9 859 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 ALG3Q92685 438 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 THAP11Q96EK4 314 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 BIRC8Q96P09 236 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 OR1F2PQ96R84 312 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PANX2Q96RD6 677 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PKP4Q99569 1192 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 ETNK1Q9HBU6 452 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 EDARQ9UNE0 448 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 PCDHA13Q9Y5I0 950 aa11.7□□□□□ -0.54
SNX29-207ENST00000568949 E7ENX8 843 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 H3BMM5 538 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 H7BY64 318 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 SGK494L7N484 410 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 SMAPO00193 183 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 CTAG2O75638 210 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 SLC16A8O95907 504 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 PTMAP06454 111 aaKnown RBP11.69□□□□□ -0.54
SNX29-207ENST00000568949 GRIA1P42261 906 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 ITGA8P53708 1063 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 OR4D2P58180 307 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 RPS15AP62244 130 aaKnown RBP11.69□□□□□ -0.54
SNX29-207ENST00000568949 TAP2Q03519 686 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 PMPCAQ10713 525 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 PCID2Q5JVF3 399 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 CTSL3PQ5NE16 218 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 MEI1Q5TIA1 1274 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 CCDC71Q8IV32 467 aaPredicted RBP11.69□□□□□ -0.54
SNX29-207ENST00000568949 SULF2Q8IWU5 870 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 ARMC10Q8N2F6 343 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 CAMKVQ8NCB2 501 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 ZNF480Q8WV37 535 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 PRAP1Q96NZ9 151 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 ANKHQ9HCJ1 492 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 LANCL2Q9NS86 450 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 TMEM184CQ9NVA4 438 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 TSR3Q9UJK0 312 aaKnown RBP11.69□□□□□ -0.54
SNX29-207ENST00000568949 TFR2Q9UP52 801 aa11.69□□□□□ -0.54
SNX29-207ENST00000568949 FAM237BA0A1B0GVD1 139 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 AKR1B15C9JRZ8 316 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 E7EVH7 732 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 FCHO1O14526 889 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 HS6ST1O60243 411 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 CDC40O60508 579 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNX29-207ENST00000568949 NIPSNAP2O75323 286 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 STATHP02808 62 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 FMO4P31512 558 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 STIP1P31948 543 aaKnown RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 ADARP55265 1226 aaKnown RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 NUP107P57740 925 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 MEF2AQ02078 507 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 KLF1Q13351 362 aaPredicted RBP11.68□□□□□ -0.54
SNX29-207ENST00000568949 SPA17Q15506 151 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 CEBPEQ15744 281 aa11.68□□□□□ -0.54
SNX29-207ENST00000568949 KLHL38Q2WGJ6 581 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms