RNA–Protein interactions for RNA: ENST00000568591.5

PKD1-235, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 2,545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-235ENST00000568591 NDUFAF4Q9P032 175 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 LYVE1Q9Y5Y7 322 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 ZNF106Q9H2Y7 1883 aaKnown RBP17.67■□□□□ 0.42
PKD1-235ENST00000568591 METTL15A6NJ78 407 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 SOCS5O75159 536 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 UPK1BO75841 260 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 KCNK2O95069 426 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 PTHP01270 115 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 ALOX5P09917 674 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 OR56A5P0C7T3 313 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 ABRQ12979 859 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 FADDQ13158 208 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 TP53BP2Q13625 1128 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 DOC2AQ14183 400 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 HS6ST3Q8IZP7 471 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 OR8J2Q8NGG1 315 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 WDR20Q8TBZ3 569 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 SMG9Q9H0W8 520 aaKnown RBP17.67■□□□□ 0.42
PKD1-235ENST00000568591 ZDHHC6Q9H6R6 413 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 PCDH10Q9P2E7 1040 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 PSORS1C1Q9UIG5 152 aa17.67■□□□□ 0.42
PKD1-235ENST00000568591 C1orf226A1L170 272 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 SUV39H1O43463 412 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 TLL1O43897 1013 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 NUAK1O60285 661 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 SLC10A3P09131 477 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 SRCP12931 536 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 HLA-EP13747 358 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 GJA1P17302 382 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 RCVRNP35243 200 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 SRSF11Q05519 484 aaKnown RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 TMCO2Q7Z6W1 182 aaPredicted RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 OR4K1Q8NGD4 311 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 OR9Q2Q8NGE9 314 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 FCRL1Q96LA6 429 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 Q96MT0 163 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 OR4K3Q96R72 315 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 CENPOQ9BU64 300 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 GPC6Q9Y625 555 aaPredicted RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 MICAL3Q7RTP6 2002 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 MYOFQ9NZM1 2061 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 PABPN1LA6NDY0 278 aaKnown RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 GFYI3L273 518 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 PRRG1O14668 218 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 CA12O43570 354 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ABLIM3O94929 683 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 C8GP07360 202 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ETFAP13804 333 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ACSM2AQ08AH3 577 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 RGNQ15493 299 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ZNF385BQ569K4 471 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ACSM2BQ68CK6 577 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 LINC00299Q6ZSB3 139 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ARMC8Q8IUR7 673 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 DNAJC22Q8N4W6 341 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 Q8N9G6 341 aaPredicted RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 IPCEF1Q8WWN9 437 aaPredicted RBP17.66■□□□□ 0.42
PKD1-235ENST00000568591 SLX1AQ9BQ83 275 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 CDADC1Q9BWV3 514 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 B4GALT6Q9UBX8 382 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 ACSL6Q9UKU0 697 aa17.66■□□□□ 0.42
PKD1-235ENST00000568591 IGLV3-16A0A075B6K0 115 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 ARHGEF33A8MVX0 844 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 HSMCR30P0CW71 290 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 PABPC1P11940 636 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■□□ 14.9
PKD1-235ENST00000568591 ERICH5Q6P6B1 374 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 CMTM8Q8IZV2 173 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 SLC7A5P1Q8MH63 180 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 KIAA1958Q8N8K9 716 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 POC5Q8NA72 575 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 CHST14Q8NCH0 376 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 GABARAPL3Q9BY60 117 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 SH3BP4Q9P0V3 963 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 ANKMY1Q9P2S6 941 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 EXO1Q9UQ84 846 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 AGAP5A6NIR3 686 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 TNFRSF11BO00300 401 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 SCAMP2O15127 329 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 ATP1B2P14415 290 aaPredicted RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 CTSKP43235 329 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 PREPP48147 710 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 CDH12P55289 794 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 NAE1Q13564 534 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 FAM180BQ6P0A1 224 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 DPY19L3Q6ZPD9 716 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 THOC6Q86W42 341 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 FAM9CQ8IZT9 166 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 MINDY2Q8NBR6 621 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 UTP15Q8TED0 518 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 C11orf24Q96F05 449 aaPredicted RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 EPYCQ99645 322 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 CHCHD6Q9BRQ6 235 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 ROGDIQ9GZN7 287 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 SIAEQ9HAT2 523 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 FAM120CQ9NX05 1096 aaKnown RBP17.65■□□□□ 0.42
PKD1-235ENST00000568591 ZNF226Q9NYT6 803 aa17.65■□□□□ 0.42
PKD1-235ENST00000568591 SGTAO43765 313 aa17.64■□□□□ 0.41
PKD1-235ENST00000568591 SSX4O60224 188 aa17.64■□□□□ 0.41
PKD1-235ENST00000568591 DLGAP3O95886 979 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms