RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 RPS19BP1Q86WX3 136 aaKnown RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 OTUD6BQ8N6M0 293 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 NRGNQ92686 78 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 RND1Q92730 232 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 FAM136AQ96C01 138 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 BIRC8Q96P09 236 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 PANX2Q96RD6 677 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 PKP4Q99569 1192 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 UCK2Q9BZX2 261 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 TP63Q9H3D4 680 aaPredicted RBP11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 CDCP1Q9H5V8 836 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 CHRAC1Q9NRG0 131 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 AKAP6Q13023 2319 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 SCN2AQ99250 2005 aa11.09□□□□□ -0.63
GTF3C1-209ENST00000568569 KCNE1BA0A087WTH5 132 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 MAGEB17A8MXT2 336 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 E7ENX8 843 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 H7BY64 318 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 SGK494L7N484 410 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 NIPSNAP2O75323 286 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 CDC123O75794 336 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 APRTP07741 180 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 KLK2P20151 261 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 IL10P22301 178 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 TPP2P29144 1249 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 RPS15AP62244 130 aaKnown RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 RHAGQ02094 409 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 TAP2Q03519 686 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 KLHL38Q2WGJ6 581 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 PCID2Q5JVF3 399 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 RNF187Q5TA31 235 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 THEMIS2Q5TEJ8 643 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 ARHGAP11AQ6P4F7 1023 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 VN1R4Q7Z5H5 301 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 CCDC170Q8IYT3 715 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 CLYBLQ8N0X4 340 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 SHISA5Q8N114 240 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 PPFIBP2Q8ND30 876 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 PLPP5Q8NEB5 264 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 ELP5Q8TE02 316 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 ZNF480Q8WV37 535 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 PRAP1Q96NZ9 151 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 OR1F2PQ96R84 312 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 TRIM45Q9H8W5 580 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 ANKHQ9HCJ1 492 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 RAB6BQ9NRW1 208 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 TREX1Q9NSU2 369 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 ABCF3Q9NUQ8 709 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 RNF6Q9Y252 685 aa11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 KLF13Q9Y2Y9 288 aaPredicted RBP11.08□□□□□ -0.64
GTF3C1-209ENST00000568569 PFDN6O15212 129 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 HS6ST1O60243 411 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 CDC40O60508 579 aaKnown RBP eCLIP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 PRMT3O60678 531 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 RDH16O75452 317 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 IFNB1P01574 187 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ESR1P03372 595 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 TFEBP19484 476 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 CHRM3P20309 590 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 HRH2P25021 359 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 FMO4P31512 558 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 TRHRP34981 398 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 CYLC1P35663 651 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 MEOX1P50221 254 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ITGA8P53708 1063 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ADARP55265 1226 aaKnown RBP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 OR4D2P58180 307 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 MPP1Q00013 466 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 TYSND1Q2T9J0 566 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ACSBG2Q5FVE4 666 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 MRNIPQ6NTE8 343 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 SDCCAG8Q86SQ7 713 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ZNF227Q86WZ6 799 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 KIF2BQ8N4N8 673 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 UBL4BQ8N7F7 174 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 CAMKVQ8NCB2 501 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 ZCCHC10Q8TBK6 192 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 LPGAT1Q92604 370 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 TSLPQ969D9 159 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 THAP11Q96EK4 314 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 RBCK1Q9BYM8 510 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 LANCL2Q9NS86 450 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 CCM2LQ9NUG4 571 aaPredicted RBP11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 TMEM184CQ9NVA4 438 aa11.07□□□□□ -0.64
GTF3C1-209ENST00000568569 HEATR5BQ9P2D3 2071 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 A0A1B0GTL3 188 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 GRID2IPA4D2P6 1211 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 TMEM200CA6NKL6 621 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 E5RI56 91 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 KLRC4-KLRK1H3BQV0 150 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 SYF2O95926 243 aaKnown RBP11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 ARNTP27540 789 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 HLCSP50747 726 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 SESN2P58004 480 aaPredicted RBP11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 MLF1P58340 268 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 CRADDP78560 199 aa11.06□□□□□ -0.64
GTF3C1-209ENST00000568569 TBX2Q13207 712 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms