RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 M1APQ8TC57 530 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 HES6Q96HZ4 224 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 PANX2Q96RD6 677 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 DESI2Q9BSY9 194 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 IL22Q9GZX6 179 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 CDCP1Q9H5V8 836 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 MMP25Q9NPA2 562 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 UTP6Q9NYH9 597 aaKnown RBP14.57□□□□□ -0.08
PALB2-205ENST00000567003 LRFN1Q9P244 771 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 PAK5Q9P286 719 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 ASB1Q9Y576 335 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 CAPN6Q9Y6Q1 641 aa14.57□□□□□ -0.08
PALB2-205ENST00000567003 FEZF1A0PJY2 475 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 E5RI56 91 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 MLYCDO95822 493 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 ESR1P03372 595 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 ZNF24P17028 368 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 IMPA1P29218 277 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 COILP38432 576 aaPredicted RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 RFC3P40938 356 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 BCL6P41182 706 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 CLCN7P51798 805 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 ABATP80404 500 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 BASP1P80723 227 aaKnown RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 RHAGQ02094 409 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 ACTN3Q08043 901 aaPredicted RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 USP10Q14694 798 aaKnown RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 ABRAXAS2Q15018 415 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 EXT1Q16394 746 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 MRNIPQ6NTE8 343 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 TMEM214Q6NUQ4 689 aaKnown RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 CENPUQ71F23 418 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 SDCCAG8Q86SQ7 713 aaPredicted RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 SLC13A5Q86YT5 568 aaPredicted RBP14.56□□□□□ -0.08
PALB2-205ENST00000567003 SYCE1Q8N0S2 351 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 KCT2Q8NC54 265 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 OR5T3Q8NGG3 340 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 CA5BP1Q8WTZ4 195 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 PEX11GQ96HA9 241 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 HCFC1P51610 2035 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 DNHD1Q96M86 4753 aa14.56□□□□□ -0.08
PALB2-205ENST00000567003 AKAP6Q13023 2319 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 TCRBV7S3A2A0A539 114 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 ZNF839A8K0R7 811 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 E9PLN8 166 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 H3BMM5 538 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 DNAJB6O75190 326 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 SLC25A12O75746 678 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 TSPAN12O95859 305 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 B3GALT4O96024 378 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 TPP2P29144 1249 aaPredicted RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 AGTR2P50052 363 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 SLC26A5P58743 744 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 RELAQ04206 551 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 NSDHLQ15738 373 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 RNF187Q5TA31 235 aaPredicted RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 SEL1L2Q5TEA6 688 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 ZNF227Q86WZ6 799 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 MARVELD2Q8N4S9 558 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 SLC5A8Q8N695 610 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 PRELID2Q8N945 189 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 PHF10Q8WUB8 498 aaKnown RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 POM121Q96HA1 1249 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 EBNA1BP2Q99848 306 aaKnown RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 TREX2Q9BQ50 279 aaPredicted RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 VKORC1Q9BQB6 163 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 KIFC1Q9BW19 673 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 EIF2B3Q9NR50 452 aaKnown RBP14.55□□□□□ -0.08
PALB2-205ENST00000567003 LANCL2Q9NS86 450 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 BFARQ9NZS9 450 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 NAALAD2Q9Y3Q0 740 aa14.55□□□□□ -0.08
PALB2-205ENST00000567003 NKX2-6A6NCS4 301 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 FAM90A27PA6NNH2 459 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 PRRG2O14669 202 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NDC80O14777 642 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NME2P1O60361 137 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 CYC1P08574 325 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NME2P22392 152 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 HSD17B2P37059 387 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NPY2RP49146 381 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 OR4D2P58180 307 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 RPS15AP62244 130 aaKnown RBP14.54□□□□□ -0.08
PALB2-205ENST00000567003 TBPL1P62380 186 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 OLR1P78380 273 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 MBOAT1Q6ZNC8 495 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 CEP128Q6ZU80 1094 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 PIWIL4Q7Z3Z4 852 aaKnown RBP14.54□□□□□ -0.08
PALB2-205ENST00000567003 CD163Q86VB7 1156 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 SLC26A11Q86WA9 606 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 FAM98AQ8NCA5 519 aaKnown RBP14.54□□□□□ -0.08
PALB2-205ENST00000567003 MCOLN3Q8TDD5 553 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NRGNQ92686 78 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 LPAR4Q99677 370 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 UCK2Q9BZX2 261 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 ANKHQ9HCJ1 492 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 NPDC1Q9NQX5 325 aaPredicted RBP14.54□□□□□ -0.08
PALB2-205ENST00000567003 FBXO6Q9NRD1 293 aaPredicted RBP14.54□□□□□ -0.08
PALB2-205ENST00000567003 SOX13Q9UN79 622 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 MED16Q9Y2X0 877 aa14.54□□□□□ -0.08
PALB2-205ENST00000567003 HRH3Q9Y5N1 445 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms