RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TRIM55Q9BYV6 548 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SLC7A5P2Q9GIP4 190 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 SPNS1Q9H2V7 528 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 BRF2Q9HAW0 419 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 FAM60AQ9NP50 221 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 PSD3Q9NYI0 1048 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 AHSPQ9NZD4 102 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 MARCOQ9UEW3 520 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 HAO1Q9UJM8 370 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 PILRAQ9UKJ1 303 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ADAM21Q9UKJ8 722 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 RARRES3Q9UL19 164 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 TSC22D4Q9Y3Q8 395 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 AP1M2Q9Y6Q5 423 aa7.45□□□□□ -1.22
CDH1-208ENST00000565810 ARHGEF17Q96PE2 2063 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 PTPRZ1P23471 2315 aaPredicted RBP7.45□□□□□ -1.22
CDH1-208ENST00000565810 A0A1B0GTL3 188 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 DCDC2BA2VCK2 349 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 GMNCA6NCL1 334 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 EFCAB7A8K855 629 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TMEM233B4DJY2 109 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TMEM150CB9EJG8 249 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 POLR1CO15160 346 aaPredicted RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 SKAP2O75563 359 aaPredicted RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 TGDSO95455 350 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TGFB1P01137 390 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 PDYNP01213 254 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 MSL3P1P0C860 447 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 JMJD7P0C870 316 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 FOLR1P15328 257 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 PLA2G5P39877 138 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 NEK2P51955 445 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 ITGA1P56199 1179 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RPS13P62277 151 aaKnown RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 SKP1P63208 163 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 FOXM1Q08050 763 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 CSTF3Q12996 717 aaKnown RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 TUBB3Q13509 450 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 KCNAB1Q14722 419 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 GRM7Q14831 915 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 C16orf72Q14CZ0 275 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 PDCD2Q16342 344 aaPredicted RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 NDUFA9Q16795 377 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 FAM214AQ32MH5 1076 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TMEM35AQ53FP2 167 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TCHHL1Q5QJ38 904 aaPredicted RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 WASHC2DQ5SRD0 308 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TLDC1Q6P9B6 456 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 SCIMPQ6UWF3 145 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RNF165Q6ZSG1 346 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RAB11FIP2Q7L804 512 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 CPLX4Q7Z7G2 160 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 B3GNT8Q7Z7M8 397 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 LRRC34Q8IZ02 419 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 ANKRD53Q8N9V6 530 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 OR8K5Q8NH50 307 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 WDR20Q8TBZ3 569 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 ZNF473Q8WTR7 871 aaKnown RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 ADAMTS14Q8WXS8 1223 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 C19orf60Q96EN9 201 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 LIN37Q96GY3 246 aaPredicted RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 OR6C1Q96RD1 312 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 MTERF1Q99551 399 aaKnown RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 SIKE1Q9BRV8 207 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 NUF2Q9BZD4 464 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 REXO4Q9GZR2 422 aaKnown RBP7.44□□□□□ -1.22
CDH1-208ENST00000565810 DMRT3Q9NQL9 472 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 FGF21Q9NSA1 209 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RIC8BQ9NVN3 520 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 VPS29Q9UBQ0 182 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 PPT2Q9UMR5 302 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 SLC12A4Q9UP95 1085 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 LOXL2Q9Y4K0 774 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 DNAJC15Q9Y5T4 150 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 USH1CQ9Y6N9 552 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 TMEM131Q92545 1883 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RALGAPA1Q6GYQ0 2036 aa7.44□□□□□ -1.22
CDH1-208ENST00000565810 RIF1Q5UIP0 2472 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 GOLGA4Q13439 2230 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 ARID1BQ8NFD5 2236 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 SPEGQ15772 3267 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 A0A088AWK7 358 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 CCDC187A0A096LP49 1063 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 LOC105369274A0A096LPK9 316 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 LOC102723532A0A0G2JNH3 316 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SERTM1A2A2V5 107 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 LRIT2A6NDA9 550 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SRRM3A6NNA2 597 aaPredicted RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 MAGEB17A8MXT2 336 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 B4E171 279 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 AGRPO00253 132 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 PIP5K1BO14986 540 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 NRP2O60462 931 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 VPS4BO75351 444 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 OR2B3O76000 313 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 RSL1D1O76021 490 aaKnown RBP7.43□□□□□ -1.22
CDH1-208ENST00000565810 MYO1DO94832 1006 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 SEMA3DO95025 777 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 HBQ1P09105 142 aa7.43□□□□□ -1.22
CDH1-208ENST00000565810 LINC00032P0C843 101 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms