RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PCBD2Q9H0N5 130 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 RIC8BQ9NVN3 520 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 PLA2G3Q9NZ20 509 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 WHRNQ9P202 907 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 VWA7Q9Y334 891 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 MRPS2Q9Y399 296 aaKnown RBP17.52■□□□□ 0.4
CLN6-204ENST00000564752 PSAT1Q9Y617 370 aa17.52■□□□□ 0.4
CLN6-204ENST00000564752 H7BY64 318 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 WFS1O76024 890 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 TSPAN12O95859 305 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 PGGT1BP53609 377 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 SNRPNP63162 240 aaKnown RBP17.51■□□□□ 0.39
CLN6-204ENST00000564752 PCOLCEQ15113 449 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 NDUFA9Q16795 377 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 PHKG1Q16816 387 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 ZNF324BQ6AW86 544 aaPredicted RBP17.51■□□□□ 0.39
CLN6-204ENST00000564752 AGTRAPQ6RW13 159 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 STRA8Q7Z7C7 330 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 SLC26A11Q86WA9 606 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 SIRT6Q8N6T7 355 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 PYROXD1Q8WU10 500 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 ALKBH8Q96BT7 664 aaKnown RBP17.51■□□□□ 0.39
CLN6-204ENST00000564752 PRAP1Q96NZ9 151 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 TRIM54Q9BYV2 358 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 OLAHQ9NV23 265 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 TMEM184CQ9NVA4 438 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 NSMCE4AQ9NXX6 385 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 MKL2Q9ULH7 1088 aa17.51■□□□□ 0.39
CLN6-204ENST00000564752 KCNE1BA0A087WTH5 132 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 TRAV17A0A0B4J275 112 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 FAM95CA0A1B0GW59 222 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 CELA2AP08217 269 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 ICAM2P13598 275 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 SAT1P21673 171 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 CCND1P24385 295 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 HRH2P25021 359 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 AVPR1BP47901 424 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 EFNA3P52797 238 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 MAT1AQ00266 395 aaKnown RBP17.5■□□□□ 0.39
CLN6-204ENST00000564752 NAE1Q13564 534 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
CLN6-204ENST00000564752 C17orf64Q86WR6 236 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 IMMP1LQ96LU5 166 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 TAAR6Q96RI8 345 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 SAYSD1Q9NPB0 183 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 ARL15Q9NXU5 204 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 MOCS1Q9NZB8 636 aa17.5■□□□□ 0.39
CLN6-204ENST00000564752 UTP11Q9Y3A2 253 aaKnown RBP17.5■□□□□ 0.39
CLN6-204ENST00000564752 H0YIG0 161 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 EIF3HO15372 352 aaKnown RBP eCLIP17.49■□□□□ 0.39
CLN6-204ENST00000564752 JRKO75564 520 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 STSP08842 583 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 ITGAMP11215 1152 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 ZNF37AP17032 561 aaPredicted RBP17.49■□□□□ 0.39
CLN6-204ENST00000564752 AP1S2P56377 157 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 PER3P56645 1201 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 AP2B1P63010 937 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 CBLBQ13191 982 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 INAQ16352 499 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 VN1R4Q7Z5H5 301 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 AMER2Q8N7J2 671 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 OR9A4Q8NGU2 314 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 MAGEB10Q96LZ2 347 aaPredicted RBP17.49■□□□□ 0.39
CLN6-204ENST00000564752 TUBB6Q9BUF5 446 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 RAB17Q9H0T7 212 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 GRHL1Q9NZI5 618 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 SVILO95425 2214 aa17.49■□□□□ 0.39
CLN6-204ENST00000564752 DIDO1Q9BTC0 2240 aaKnown RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 NSA2O95478 260 aaKnown RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 WDPCPO95876 746 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 STATHP02808 62 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 ENO2P09104 434 aaPredicted RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 C8orf89P0DMQ9 161 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 RPS15AP62244 130 aaKnown RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 ZRSR2Q15696 482 aaKnown RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 DUPD1Q68J44 220 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 CAPN13Q6MZZ7 669 aaPredicted RBP17.48■□□□□ 0.39
CLN6-204ENST00000564752 LCTLQ6UWM7 567 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 CDKL2Q92772 493 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 THAP11Q96EK4 314 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 CYTH2Q99418 400 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 HAUS8Q9BT25 410 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 SGPP1Q9BX95 441 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 VN1R1Q9GZP7 353 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 RNF32Q9H0A6 362 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.48■□□□□ 0.392e-6■■■□□ 15
CLN6-204ENST00000564752 RHOJQ9H4E5 214 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 SH2B3Q9UQQ2 575 aa17.48■□□□□ 0.39
CLN6-204ENST00000564752 A0A1B0GUH1 482 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 F10P00742 488 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 CYC1P08574 325 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 CDH1P12830 882 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 SSTR1P30872 391 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 TDGF1P3P51864 188 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 CKAP4Q07065 602 aaKnown RBP17.47■□□□□ 0.39
CLN6-204ENST00000564752 ILF2Q12905 390 aaKnown RBP17.47■□□□□ 0.39
CLN6-204ENST00000564752 ZNF460Q14592 562 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 PRSS41Q7RTY9 318 aa17.47■□□□□ 0.39
CLN6-204ENST00000564752 SHISA5Q8N114 240 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms