RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TCTEX1D4Q5JR98 221 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 HECTD3Q5T447 861 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 GKAP1Q5VSY0 366 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 CFAP77Q6ZQR2 320 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 CCDC186Q7Z3E2 898 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 PIGZQ86VD9 579 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 POC5Q8NA72 575 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 POMGNT2Q8NAT1 580 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 OR5AP2Q8NGF4 316 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 TBC1D16Q8TBP0 767 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 EXOC4Q96A65 974 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 CNDP2Q96KP4 475 aaKnown RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 C16orf45Q96MC5 204 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 USP28Q96RU2 1077 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 FTOQ9C0B1 505 aaKnown RBP eCLIP3.63□□□□□ -1.83
CHD9-212ENST00000564641 ALDH8A1Q9H2A2 487 aaPredicted RBP3.63□□□□□ -1.83
CHD9-212ENST00000564641 PLK3Q9H4B4 646 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 DNAJC18Q9H819 358 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 NPAP1Q9NZP6 1156 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 FAM169AQ9Y6X4 670 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 DLG5Q8TDM6 1919 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ABCC4O15439 1325 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 KDM3BQ7LBC6 1761 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 ADAMTSL1Q8N6G6 1762 aa3.63□□□□□ -1.83
CHD9-212ENST00000564641 A8MXE2 369 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 E9PI62 339 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 NEBLO76041 1014 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 SMC2O95347 1197 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 QDPRP09417 244 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 CLTBP09497 229 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 PNMA6AP0CW24 399 aaPredicted RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 H2AFXP16104 143 aaPredicted RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 SAT1P21673 171 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 EEF1DP29692 281 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 OAS2P29728 719 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 SLC6A6P31641 620 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 RDXP35241 583 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 HNF4AP41235 474 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 SLC15A1P46059 708 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 LMAN1P49257 510 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 RAD23AP54725 363 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 RPS8P62241 208 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 MS4A2Q01362 244 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 CXCL9Q07325 125 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 AIMP1Q12904 312 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 IKQ13123 557 aaPredicted RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 SMC1AQ14683 1233 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 TMEM266Q2M3C6 531 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 SUSD4Q5VX71 490 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 ZNF774Q6NX45 483 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 PAQR6Q6TCH4 344 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 GBP6Q6ZN66 633 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 COPS6Q7L5N1 327 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 APOBEC3FQ8IUX4 373 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 EFCAB13Q8IY85 973 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 ZNF843Q8N446 348 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 OTUD6BQ8N6M0 293 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 ITFG2Q969R8 447 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 SLC22A18Q96BI1 424 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 GAD1Q99259 594 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 TRAF4Q9BUZ4 470 aaPredicted RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 LRRC61Q9BV99 259 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 WWTR1Q9GZV5 400 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 PRR34Q9NV39 138 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 WSB2Q9NYS7 404 aaPredicted RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 FBXL17Q9UF56 701 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 LRWD1Q9UFC0 647 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 SEC63Q9UGP8 760 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 ZDHHC2Q9UIJ5 367 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 OSGIN1Q9UJX0 560 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 EXO1Q9UQ84 846 aaKnown RBP3.62□□□□□ -1.83
CHD9-212ENST00000564641 WDR37Q9Y2I8 494 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 THSD7BQ9C0I4 1608 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 ABCC12Q96J65 1359 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 CASP8AP2Q9UKL3 1982 aa3.62□□□□□ -1.83
CHD9-212ENST00000564641 ZNF609O15014 1411 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 LOC100509620A0A075B734 347 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 MSGN1A6NI15 193 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 CTAGE5O15320 804 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 ECE2O60344 883 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 RPS6KA5O75582 802 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 UFL1O94874 794 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 CCDC192P0DO97 292 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 NEFHP12036 1026 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 SCG2P13521 617 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 NMBRP28336 390 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 MRPL12P52815 198 aaKnown RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 SCARB2Q14108 478 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 DLG2Q15700 870 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 BMP2KLQ5H9B9 411 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 MDH1BQ5I0G3 518 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 ERMARDQ5T6L9 678 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 KRT79Q5XKE5 535 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 AP1ARQ63HQ0 302 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 TMEM198Q66K66 360 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 VSIG1Q86XK7 387 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 DNAAF5Q86Y56 855 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 LMNTD2Q8IXW0 634 aa3.61□□□□□ -1.83
CHD9-212ENST00000564641 SYT2Q8N9I0 419 aaPredicted RBP3.61□□□□□ -1.83
CHD9-212ENST00000564641 KCTD6Q8NC69 237 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms