RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 OR4K3Q96R72 315 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CIB1Q99828 191 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 FANCEQ9HB96 536 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 CD320Q9NPF0 282 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 C12orf4Q9NQ89 552 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 ATPIF1Q9UII2 106 aa17.06■□□□□ 0.32
GDE1-203ENST00000564172 PNMA8BQ9ULN7 279 aaPredicted RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 COPG1Q9Y678 874 aaKnown RBP17.06■□□□□ 0.32
GDE1-203ENST00000564172 A0A1W2PPC4 97 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 TOR1BO14657 336 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 CAPNS1P04632 268 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 IDSP22304 550 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 RABIFP47224 123 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 PRKG2Q13237 762 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 PGM2L1Q6PCE3 622 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 IL27RAQ6UWB1 636 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 Q6ZSR9 355 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 RD3Q7Z3Z2 195 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 GPR141Q7Z602 305 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 POU5F2Q8N7G0 328 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 INSM2Q96T92 566 aaPredicted RBP17.05■□□□□ 0.32
GDE1-203ENST00000564172 ORAI3Q9BRQ5 295 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 RUBCNLQ9H714 662 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 SACM1LQ9NTJ5 587 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 GIMAP2Q9UG22 337 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 SNTNA6NMZ2 147 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 E7ENX8 843 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 H0YJX3 145 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 FFAR3O14843 346 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 ACOX3O15254 700 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 GPR42O15529 346 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 VPS4BO75351 444 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 GMNNO75496 209 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 H6PDO95479 791 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 RPN2P04844 631 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 NUDT1P36639 197 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 TAP2Q03519 686 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 ABRAXAS2Q15018 415 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 GGTA1PQ4G0N0 100 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 PAOXQ6QHF9 649 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 LRRC56Q8IYG6 542 aaPredicted RBP17.05■□□□□ 0.32
GDE1-203ENST00000564172 L3MBTL4Q8NA19 623 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 OR2T11Q8NH01 316 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 HBEGFQ99075 208 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 KLQ9UEF7 1012 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 CNOT11Q9UKZ1 510 aaKnown RBP17.05■□□□□ 0.32
GDE1-203ENST00000564172 AP4S1Q9Y587 144 aa17.05■□□□□ 0.32
GDE1-203ENST00000564172 PRR35P0CG20 571 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CHIT1Q13231 466 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CLCA4Q14CN2 919 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CPSF6Q16630 551 aaKnown RBP eCLIP17.04■□□□□ 0.32
GDE1-203ENST00000564172 CEP78Q5JTW2 689 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CAPN13Q6MZZ7 669 aaPredicted RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 IDO2Q6ZQW0 420 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 TBC1D21Q8IYX1 336 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SLC22A18ASQ8N1D0 253 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 LMNTD1Q8N9Z9 388 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 C12orf66Q96MD2 445 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 NOSIPQ9Y314 301 aaKnown RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 SPEF1Q9Y4P9 236 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SLC22A2O15244 555 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 ULK1O75385 1050 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 ALDOCP09972 364 aaKnown RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 CD1EP15812 388 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 LBPP18428 481 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CPA2P48052 419 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 CXCL12P48061 93 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PNLIPRP1P54315 467 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SRP54P61011 504 aaKnown RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 TBPL1P62380 186 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 FASTKQ14296 549 aaKnown RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 ALG11Q2TAA5 492 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 UAP1L1Q3KQV9 507 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PQLC1Q8N2U9 271 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SNX19Q92543 992 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 IL17FQ96PD4 163 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SGPP1Q9BX95 441 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SLC29A3Q9BZD2 475 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 TRIT1Q9H3H1 467 aaKnown RBP17.04■□□□□ 0.32
GDE1-203ENST00000564172 RMND5AQ9H871 391 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PRDM8Q9NQV8 689 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PLAGL1Q9UM63 463 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PCDHGB4Q9UN71 923 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 INVSQ9Y283 1065 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 PCDHGB5Q9Y5G0 923 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 SLCO1B1Q9Y6L6 691 aa17.04■□□□□ 0.32
GDE1-203ENST00000564172 GON4LQ3T8J9 2241 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 KCNE1BA0A087WTH5 132 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 LOC100653049A0A140TA62 436 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 PDZK1P1A8MUH7 402 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 NDUFS2O75306 463 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 KRT34O76011 436 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 PIK3R1P27986 724 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 CPOXP36551 454 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 CTBSQ01459 385 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 IRF8Q02556 426 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 RNF165Q6ZSG1 346 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 CAPSLQ8WWF8 208 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 CMTM5Q96DZ9 223 aa17.03■□□□□ 0.32
GDE1-203ENST00000564172 FERD3LQ96RJ6 166 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms