RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 BTKQ06187 659 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 ABRAXAS2Q15018 415 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 RBBP5Q15291 538 aaKnown RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 TCHHL1Q5QJ38 904 aaPredicted RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 TMEM71Q6P5X7 295 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 EPGNQ6UW88 154 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 FAM92BQ6ZTR7 304 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 USP53Q70EK8 1073 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 MAVSQ7Z434 540 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 TRIM46Q7Z4K8 759 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 TTLQ8NG68 377 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 RFWD2Q8NHY2 731 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 WDR48Q8TAF3 677 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 C10orf82Q8WW14 230 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 SELENOMQ8WWX9 145 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 THAP11Q96EK4 314 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 C19orf60Q96EN9 201 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 PRR11Q96HE9 360 aaPredicted RBP12.37□□□□□ -0.43
SPG7-209ENST00000564047 PPM1MQ96MI6 270 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 TRAPPC9Q96Q05 1148 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 MAP3K3Q99759 626 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 NUF2Q9BZD4 464 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 RHBGQ9H310 441 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 TUBB1Q9H4B7 451 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 MEAF6Q9HAF1 191 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 KCNK13Q9HB14 408 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 SEMA5BQ9P283 1151 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 KLHL20Q9Y2M5 609 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 NEUROG3Q9Y4Z2 214 aa12.37□□□□□ -0.43
SPG7-209ENST00000564047 ANKRD12Q6UB98 2062 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 FEZF1A0PJY2 475 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 SLC9B1P1A6NJY1 282 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 SLC28A1O00337 649 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 FOXE1O00358 373 aaPredicted RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 HAT1O14929 419 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 TOX3O15405 576 aaPredicted RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 OR1F1O43749 312 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PDYNP01213 254 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 JUNP05412 331 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 PCNAP12004 261 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 HSD3B1P14060 373 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PVRP15151 417 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 ST6GAL1P15907 406 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 HSD3B2P26439 372 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 AHRP35869 848 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PIK3CBP42338 1070 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 ACADVLP49748 655 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 NCALDP61601 193 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 RPS15AP62244 130 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 PHEXP78562 749 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 CSTF3Q12996 717 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 ILKQ13418 452 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 SGO1Q5FBB7 561 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 XKR7Q5GH72 579 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 FAM219BQ5XKK7 198 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PRSS42Q7Z5A4 293 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PIP4P1Q86T03 277 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 DDIASQ8IXT1 998 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 C19orf47Q8N9M1 422 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 MFSD9Q8NBP5 474 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 OR4D9Q8NGE8 314 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 HUS1BQ8NHY5 278 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 THOC1Q96FV9 657 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 TCTN2Q96GX1 697 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 MAELQ96JY0 434 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 NUDT22Q9BRQ3 303 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 CHRNA10Q9GZZ6 450 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 BRF2Q9HAW0 419 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 FARSBQ9NSD9 589 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 TXLNGQ9NUQ3 528 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PDP2Q9P2J9 529 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 DCTN4Q9UJW0 460 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PILRAQ9UKJ1 303 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 PPT2Q9UMR5 302 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 APOBEC2Q9Y235 224 aaKnown RBP12.36□□□□□ -0.43
SPG7-209ENST00000564047 BTRCQ9Y297 605 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 MAST4O15021 2626 aa12.36□□□□□ -0.43
SPG7-209ENST00000564047 A0A0G2JND7 137 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ANKDD1BA6NHY2 528 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 SDHDO14521 159 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 RGS14O43566 566 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 KIF1CO43896 1103 aaKnown RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 LCMT2O60294 686 aaKnown RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 NRP2O60462 931 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 HNRNPCL1O60812 293 aaKnown RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 VPS4BO75351 444 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ZBTB11O95625 1053 aaPredicted RBP12.35□□□□□ -0.43
SPG7-209ENST00000564047 LINC00032P0C843 101 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 BCL6P41182 706 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 IDH3AP50213 366 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 NEK2P51955 445 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ARFIP2P53365 341 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 ZIC1Q15915 447 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 VWA5B1Q5TIE3 1220 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 CACHD1Q5VU97 1274 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 FBXO42Q6P3S6 717 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 SCIMPQ6UWF3 145 aa12.35□□□□□ -0.43
SPG7-209ENST00000564047 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms