RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 KCNJ11Q14654 390 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 TMEM198Q66K66 360 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 TMEM214Q6NUQ4 689 aaKnown RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 DARS2Q6PI48 645 aaKnown RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 FAM71DQ8N9W8 422 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 NFAM1Q8NET5 270 aaPredicted RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 OR5T3Q8NGG3 340 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 OR52N2Q8NGI0 321 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 OR4L1Q8NH43 312 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 OR51Q1Q8NH59 317 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 GIMAP7Q8NHV1 300 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 SLC35B2Q8TB61 432 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 ASB5Q8WWX0 329 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 ALPK1Q96QP1 1244 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 PKP4Q99569 1192 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 GPATCH1Q9BRR8 931 aaKnown RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 CDCP1Q9H5V8 836 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 MRPS30Q9NP92 439 aaKnown RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 DNAJB12Q9NXW2 375 aaKnown RBP9.71□□□□□ -0.86
SF3B3-204ENST00000563739 COQ3Q9NZJ6 369 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 MED16Q9Y2X0 877 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 TCAF1Q9Y4C2 921 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 LIPGQ9Y5X9 500 aa9.71□□□□□ -0.86
SF3B3-204ENST00000563739 E7ENX8 843 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 H0YIG0 161 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 SGK494L7N484 410 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 PHF2O75151 1096 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 PSIP1O75475 530 aaKnown RBP9.7□□□□□ -0.86
SF3B3-204ENST00000563739 SUN1O94901 812 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 B3GALT4O96024 378 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 F7P08709 466 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-204ENST00000563739 ANXA5P08758 320 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 EZRP15311 586 aaKnown RBP9.7□□□□□ -0.86
SF3B3-204ENST00000563739 RPS3P23396 243 aaKnown RBP eCLIP9.7□□□□□ -0.862e-7■■■□□ 18.2
SF3B3-204ENST00000563739 BCL6P41182 706 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 MLF1P58340 268 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 COPS2P61201 443 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 TAP2Q03519 686 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 EXT1Q16394 746 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 MINDY4Q4G0A6 757 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 ODF2Q5BJF6 829 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 ACSBG2Q5FVE4 666 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 MDGA2Q7Z553 956 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 PRUNE1Q86TP1 453 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 SULF2Q8IWU5 870 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 ZFP62Q8NB50 900 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-204ENST00000563739 CHDHQ8NE62 594 aaPredicted RBP9.7□□□□□ -0.86
SF3B3-204ENST00000563739 PLPP5Q8NEB5 264 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 OR9A1PQ8NGU1 263 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 ZNF480Q8WV37 535 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 SMPDL3AQ92484 453 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 MBD6Q96DN6 1003 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 TM4SF19Q96DZ7 209 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 TREX1Q9NSU2 369 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 PCDHA3Q9Y5H8 950 aa9.7□□□□□ -0.86
SF3B3-204ENST00000563739 IGKV3D-11A0A0A0MRZ8 115 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 A0A0G2JNJ9 132 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 FAM237BA0A1B0GVD1 139 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 A0A1W2PPR1 153 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CTAGE15A4D2H0 777 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 ZNF860A6NHJ4 632 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 VPS26AO75436 327 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 MLYCDO95822 493 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 SLC16A8O95907 504 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CTNNA2P26232 953 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 COILP38432 576 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-204ENST00000563739 OC90Q02509 493 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-204ENST00000563739 MYBPHQ13203 477 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 PTK6Q13882 451 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 ABRAXAS2Q15018 415 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 TMED2Q15363 201 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 MAPKAPK3Q16644 382 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 PAMR1Q6UXH9 720 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CTAGE6Q86UF2 777 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 RPS19BP1Q86WX3 136 aaKnown RBP9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CDC20BQ86Y33 519 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 ZZZ3Q8IYH5 903 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 AFAP1L2Q8N4X5 818 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 KCT2Q8NC54 265 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 APCDD1LQ8NCL9 501 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 LPGAT1Q92604 370 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 FAM136AQ96C01 138 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 PPP1R2P1Q96PQ5 205 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 PANX2Q96RD6 677 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 TP63Q9H3D4 680 aaPredicted RBP9.69□□□□□ -0.86
SF3B3-204ENST00000563739 RASSF1Q9NS23 344 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 PNPLA3Q9NST1 481 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 Q9UFV3 132 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 VPS9D1Q9Y2B5 631 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 CLDN16Q9Y5I7 305 aa9.69□□□□□ -0.86
SF3B3-204ENST00000563739 MPDZO75970 2070 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 MAGEB17A8MXT2 336 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 C4orf51C9J302 202 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 NDC80O14777 642 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 PRKNO60260 465 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 LCMT2O60294 686 aaKnown RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 CDC123O75794 336 aaPredicted RBP9.68□□□□□ -0.86
SF3B3-204ENST00000563739 ATE1O95260 518 aa9.68□□□□□ -0.86
SF3B3-204ENST00000563739 GLI4P10075 376 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms