RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 PRCPP42785 496 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC1A3P43003 542 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NPBWR1P48145 328 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NOVP48745 357 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 STARP49675 285 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ENTPD1P49961 510 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CLCN4P51793 760 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CLCN5P51795 746 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TXNL4AP83876 142 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 XIAPP98170 497 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC18A2Q05940 514 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CCDC173Q0VFZ6 552 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CRHR2Q13324 411 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NAE1Q13564 534 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DHX34Q14147 1143 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CYP1B1Q16678 543 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 C2orf68Q2NKX9 166 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC9C1Q4G0N8 1177 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF385BQ569K4 471 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 METRNLQ641Q3 311 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PDPK2PQ6A1A2 396 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 FCRLBQ6BAA4 426 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TTC19Q6DKK2 380 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SNRNP48Q6IEG0 339 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CORO6Q6QEF8 472 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 B3GLCTQ6Y288 498 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DGLUCYQ7Z3D6 616 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MAVSQ7Z434 540 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NRARPQ7Z6K4 114 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 C1orf87Q8N0U7 546 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ZBTB2Q8N680 514 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BCORP1Q8N888 145 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PNPLA1Q8N8W4 532 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BOLLQ8N9W6 283 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BPIFCQ8NFQ6 507 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RAB3IL1Q8TBN0 382 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DQX1Q8TE96 717 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 AKAP1Q92667 903 aaKnown RBP eCLIP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF707Q96C28 371 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 STAMBPL1Q96FJ0 436 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC41A3Q96GZ6 507 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RPRD1AQ96P16 312 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 COQ7Q99807 217 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CITED1Q99966 193 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 C19orf43Q9BQ61 176 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ATG101Q9BSB4 218 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 C11orf84Q9BUA3 381 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TSPYL1Q9H0U9 437 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CUEDC2Q9H467 287 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MVB12BQ9H7P6 319 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 KCNK12Q9HB15 430 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC38A10Q9HBR0 1119 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RDH8Q9NYR8 311 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 GRHL1Q9NZI5 618 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ANGPTL2Q9UKU9 493 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MYH7P12883 1935 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A1B0GUL6 1792 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MYH1P12882 1939 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 IGKV6D-41A0A0C4DH26 115 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 A0A1W2PPW3 197 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ARHGEF35A5YM69 484 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ZNF879B4DU55 563 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 HSBP1L1C9JCN9 74 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 VCYO14598 125 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PRYO14603 147 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SLC22A2O15244 555 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TRIAP1O43715 76 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MBD3O95983 291 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 AGTP01019 485 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CSF2P04141 144 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RFPL3SP0C7P2 107 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 SNHG28P0DPA3 235 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 APEHP13798 732 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TUBG1P23258 451 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MPZP25189 248 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CFPP27918 469 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ITPKBP27987 946 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 NDUFS1P28331 727 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 EPHB2P29323 1055 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 HLA-FP30511 346 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 CA8P35219 290 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 DLSTP36957 453 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 LINC00310P59036 64 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 ROR2Q01974 943 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RHAGQ02094 409 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 BST1Q10588 318 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 GK2Q14410 553 aaPredicted RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 PDIA5Q14554 519 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 STXBP2Q15833 593 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TCTN1Q2MV58 587 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TBC1D25Q3MII6 688 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 GPAT3Q53EU6 434 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RABGAP1LQ5R372 815 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 LIN9Q5TKA1 542 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 RNF207Q6ZRF8 634 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MOB2Q70IA6 237 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 MEPCEQ7L2J0 689 aaKnown RBP4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 COMTD1Q86VU5 262 aa4.97□□□□□ -1.61
VPS35P1-201ENST00000563400 TMPRSS6Q8IU80 811 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms