RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 F3P13726 295 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 TYMPP19971 482 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 EFNA1P20827 205 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CA4P22748 312 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ITGA3P26006 1051 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CDX1P47902 265 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 GLIPR1P48060 266 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 VAMP7P51809 220 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SULT2A1Q06520 285 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC25A53Q5H9E4 307 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 LYSMD4Q5XG99 296 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 OR4A47Q6IF82 309 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ZCCHC12Q6PEW1 402 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CEACAM20Q6UY09 585 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 PHLDB2Q86SQ0 1253 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ASPGQ86U10 573 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ISCA2Q86U28 154 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ANKRD46Q86W74 232 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 TDHQ8IZJ6 230 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CNPY4Q8N129 248 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 MAPKAPK5-AS1Q8N8E1 139 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 RTL3Q8N8U3 475 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 NOA1Q8NC60 698 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CCNYQ8ND76 341 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 OR10V1Q8NGI7 309 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 OR52E1Q8NGJ3 308 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 P2RX5Q93086 422 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF501Q96CX3 271 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 DTD2Q96FN9 168 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SENP5Q96HI0 755 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 RBM41Q96IZ5 413 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 IDI2Q9BXS1 227 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ABCG4Q9H172 646 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 SDR39U1Q9NRG7 319 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ECHDC1Q9NTX5 307 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 ZCCHC3Q9NUD5 404 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 PDRG1Q9NUG6 133 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 CYP39A1Q9NYL5 469 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 NINJ2Q9NZG7 142 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 LEF1Q9UJU2 399 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 PA2G4Q9UQ80 394 aaKnown RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 NUDCQ9Y266 331 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 EXOC6BQ9Y2D4 811 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 RPH3AQ9Y2J0 694 aaPredicted RBP2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 KLK4Q9Y5K2 254 aa2.93□□□□□ -1.94
SHCBP1-202ENST00000563219 MYH14Q7Z406 1995 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 WDR81Q562E7 1941 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 IGLV9-49A0A0B4J1Y8 123 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 A0A0G2JLW4 131 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ILVBLA1L0T0 632 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TLR4O00206 839 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ZNF197O14709 1029 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ATP6V0E1O15342 81 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ACSL4O60488 711 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 HSF2BPO75031 334 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ATP6V1G1O75348 118 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 C9P02748 559 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ALPPP05187 535 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 CHRNGP07510 517 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 NUDT17P0C025 328 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ALPPL2P10696 532 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 GHRP10912 638 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 DUTP33316 252 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 SFTPDP35247 375 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 NR0B1P51843 470 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 CLDN15P56746 228 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 FKBP1BP68106 108 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 CACNG1Q06432 222 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 IL10RBQ08334 325 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TRAP1Q12931 704 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TRA2AQ13595 282 aaKnown RBP eCLIP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 HERC3Q15034 1050 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ACKR1Q16570 336 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 MRGPRG-AS1Q2M3A8 158 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 KIAA1644Q3SXP7 199 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TAF1BQ53T94 588 aaPredicted RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 ARHGAP17Q68EM7 881 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 KCTD11Q693B1 232 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 OR4C11Q6IEV9 310 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 FUT10Q6P4F1 479 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TMEM126BQ8IUX1 230 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 APLFQ8IW19 511 aaPredicted RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 KLHDC8AQ8IYD2 350 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 THEM5Q8N1Q8 247 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 CNBD1Q8NA66 436 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 SLC13A3Q8WWT9 602 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TMEM143Q96AN5 459 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 EPSTI1Q96J88 318 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 DDX50Q9BQ39 737 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 SPXQ9BT56 116 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 C1orf21Q9H246 121 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 SYTL2Q9HCH5 934 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 C2orf42Q9NWW7 574 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 FLRT3Q9NZU0 649 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 IL19Q9UHD0 177 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 HOOK1Q9UJC3 728 aaKnown RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 TMED7Q9Y3B3 224 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 MTF2Q9Y483 593 aaPredicted RBP2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 COLEC10Q9Y6Z7 277 aa2.92□□□□□ -1.94
SHCBP1-202ENST00000563219 KIAA1210Q9ULL0 1709 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms