RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 SLC13A3Q8WWT9 602 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 CCT6BQ92526 530 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 PMEPA1Q969W9 287 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 SLC29A3Q9BZD2 475 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 ULBP3Q9BZM4 244 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 SPRTNQ9H040 489 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-207ENST00000563109 ADGRE2Q9UHX3 823 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 PCDHGA7Q9Y5G6 932 aa17.97■□□□□ 0.47
RAB40C-207ENST00000563109 TMEM114B3SHH9 223 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 H0YIV9 168 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 BRINP1O60477 761 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 CPNE3O75131 537 aaKnown RBP17.96■□□□□ 0.47
RAB40C-207ENST00000563109 OR4F21O95013 312 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ESRRBO95718 433 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 GRK2P25098 689 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 CD82P27701 267 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 HMOX2P30519 316 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ARSFP54793 590 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ERVPABLB-1P60509 514 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 IFT88Q13099 833 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 PWP1Q13610 501 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 C10orf62Q5T681 223 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-207ENST00000563109 LETMD1Q6P1Q0 360 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 VN1R4Q7Z5H5 301 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 SYVN1Q86TM6 617 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 LAS2Q8IYD9 372 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ARFGAP2Q8N6H7 521 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ANKRD53Q8N9V6 530 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 RHBGQ9H310 441 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ELOVL6Q9H5J4 265 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 ACTR5Q9H9F9 607 aaPredicted RBP17.96■□□□□ 0.47
RAB40C-207ENST00000563109 STARD5Q9NSY2 213 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 TXLNGQ9NUQ3 528 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 SNX6Q9UNH7 406 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 PCDHB3Q9Y5E6 796 aa17.96■□□□□ 0.47
RAB40C-207ENST00000563109 FITM1A5D6W6 292 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 PPP6CO00743 305 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 P2RX6O15547 441 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF749O43361 778 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 CLEC3AO75596 197 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 KIAA0754O94854 1291 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 STATHP02808 62 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 CTSBP07858 339 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 CHN1P15882 459 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 BGNP21810 368 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 SLC5A2P31639 672 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 DDX39BQ13838 428 aaKnown RBP17.95■□□□□ 0.46
RAB40C-207ENST00000563109 ZRSR2Q15696 482 aaKnown RBP17.95■□□□□ 0.46
RAB40C-207ENST00000563109 NDUFA9Q16795 377 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 HKDC1Q2TB90 917 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 PRTGQ2VWP7 1150 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 FAM214AQ32MH5 1076 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 MANEAQ5SRI9 462 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 CDYL2Q8N8U2 506 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 OR7G3Q8NG95 312 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 RAB3IL1Q8TBN0 382 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 MDM1Q8TC05 714 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 NT5CQ8TCD5 201 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 CLIP3Q96DZ5 547 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 SYNPO2LQ9H987 977 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 ASCL3Q9NQ33 180 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 ENAMQ9NRM1 1142 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 INTS9Q9NV88 658 aaKnown RBP17.95■□□□□ 0.46
RAB40C-207ENST00000563109 FOXJ2Q9P0K8 574 aa17.95■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF490Q9ULM2 529 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-207ENST00000563109 RUVBL1Q9Y265 456 aaKnown RBP17.95■□□□□ 0.46
RAB40C-207ENST00000563109 KNTC1P50748 2209 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 A0A1B0GTL3 188 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 MED19A0JLT2 244 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-207ENST00000563109 HYKKA2RU49 373 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 URADA6NGE7 173 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 CDRT15L2A8MXV6 281 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 H3BMH7 237 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 FFAR3O14843 346 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 GPR42O15529 346 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 STK17BO94768 372 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 SNUPNO95149 360 aaKnown RBP17.94■□□□□ 0.46
RAB40C-207ENST00000563109 TIAF1O95411 115 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 HSPA4LO95757 839 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 KRT6AP02538 564 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 KRT6BP04259 564 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 CAPN1P07384 714 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 SERPINA6P08185 405 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 PIK3CBP42338 1070 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 CCR10P46092 362 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 KRT6CP48668 564 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 EMP3P54852 163 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 STXBP1P61764 594 aaKnown RBP17.94■□□□□ 0.46
RAB40C-207ENST00000563109 GALNT1Q10472 559 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-207ENST00000563109 STX3Q13277 289 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 MUM1Q2TAK8 710 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 GARNL3Q5VVW2 1013 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 FRG2Q64ET8 278 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 ATG16L1Q676U5 607 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 CUZD1Q86UP6 607 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 HOMEZQ8IX15 550 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 METTL6Q8TCB7 284 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 TM4SF19Q96DZ7 209 aa17.94■□□□□ 0.46
RAB40C-207ENST00000563109 ZNF578Q96N58 590 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-207ENST00000563109 FRG2BQ96QU4 278 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms