RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 PRAMEF12O95522 483 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SRCP12931 536 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 IL7RP16871 459 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CDH3P22223 829 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ACVR2AP27037 513 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CD40LGP29965 261 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 VIPR1P32241 457 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 KRT20P35900 424 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 NNMTP40261 264 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PIK3CBP42338 1070 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ALDH9A1P49189 494 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 GATMP50440 423 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PCBP4P57723 403 aaKnown RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 EMX1Q04741 257 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 HSPA14Q0VDF9 509 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ITGADQ13349 1161 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 GTF2H3Q13889 308 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 MAD2L1BPQ15013 274 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 EIF4HQ15056 248 aaKnown RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CTF1Q16619 201 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 HIST2H2ACQ16777 129 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 HKDC1Q2TB90 917 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CTU2Q2VPK5 515 aaKnown RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ZNF284Q2VY69 593 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 TIMM50Q3ZCQ8 353 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ATP13A5Q4VNC0 1218 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SYTL3Q4VX76 610 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 XKR6Q5GH73 641 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PAGE2BQ5JRK9 111 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SPOUT1Q5T280 376 aaKnown RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 UBE2UQ5VVX9 321 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 HIST2H2AA3Q6FI13 130 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 C22orf39Q6P5X5 142 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 UNC5DQ6UXZ4 953 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ZNF621Q6ZSS3 439 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SLCO6A1Q86UG4 719 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PLD3Q8IV08 490 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 LACC1Q8IV20 430 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 RASGRP3Q8IV61 690 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 NRSN1Q8IZ57 195 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 APCDD1Q8J025 514 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SLC39A11Q8N1S5 342 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SYNPOQ8N3V7 929 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SLC15A4Q8N697 577 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 FAM86B1Q8N7N1 296 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ARL14EPQ8N8R7 260 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ATG16L2Q8NAA4 619 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 ZNF540Q8NDQ6 660 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 DENND6BQ8NEG7 585 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 GOT1L1Q8NHS2 421 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 BCL7CQ8WUZ0 217 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 FAR1Q8WVX9 515 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 GLMNQ92990 594 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 COQ8BQ96D53 544 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 YIPF6Q96EC8 236 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CAPNS2Q96L46 248 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 TSSK3Q96PN8 268 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 VPS35Q96QK1 796 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SMIM14Q96QK8 99 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 HBEGFQ99075 208 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 DOHHQ9BU89 302 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 EFCAB11Q9BUY7 163 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 DUSP26Q9BV47 211 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 GABARAPL3Q9BY60 117 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 MMP27Q9H306 513 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 FAM83DQ9H4H8 585 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 RIBC2Q9H4K1 309 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 EHD1Q9H4M9 534 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 IKZF5Q9H5V7 419 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 SOX17Q9H6I2 414 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 BRD9Q9H8M2 597 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 CARS2Q9HA77 564 aaKnown RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 LMCD1Q9NZU5 365 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 PDP1Q9P0J1 537 aaPredicted RBP7.23□□□□□ -1.25
CFDP1-202ENST00000562602 DLGAP4Q9Y2H0 992 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 KCNE2Q9Y6J6 123 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 THSD7BQ9C0I4 1608 aa7.23□□□□□ -1.25
CFDP1-202ENST00000562602 TSPAN11A1L157 253 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 SH3D21A4FU49 640 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 ARRDC5A6NEK1 342 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 NPIPB15A6NHN6 443 aaPredicted RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 C1QTNF9BB2RNN3 333 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 K7ERQ8 282 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 PSMD11O00231 422 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 FOXE1O00358 373 aaPredicted RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 GNB5O14775 395 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 AREL1O15033 823 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 SCAMP2O15127 329 aaKnown RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 FAM20BO75063 409 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 AOC2O75106 756 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 ATG13O75143 517 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 ZNF821O75541 412 aaPredicted RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 KRT75O95678 551 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 LRG1P02750 347 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 CKMP06732 381 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 HTR1AP08908 422 aa7.22□□□□□ -1.25
CFDP1-202ENST00000562602 MYCLP1P12525 358 aaPredicted RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 RPL17P18621 184 aaKnown RBP7.22□□□□□ -1.25
CFDP1-202ENST00000562602 EPORP19235 508 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms