RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CXCL10P02778 98 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 FABP3P05413 133 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 ABCB1P08183 1280 aaPredicted RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 JUPP14923 745 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 EFNA1P20827 205 aaPredicted RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 AP1S2P56377 157 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SRSF11Q05519 484 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SP140Q13342 867 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 CTF1Q16619 201 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 VMACQ2NL98 169 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 FAM214AQ32MH5 1076 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 XKR6Q5GH73 641 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 PLEKHS1Q5SXH7 462 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 ZDHHC20Q5W0Z9 365 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 MSANTD1Q6ZTZ1 278 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 VTCN1Q7Z7D3 282 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 GLMNQ92990 594 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 MTERF1Q99551 399 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 TM9SF3Q9HD45 589 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 KIF17Q9P2E2 1029 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 AASSQ9UDR5 926 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SLC25A13Q9UJS0 675 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 RPS6KA6Q9UK32 745 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 LINC00854A0A1B0GVQ3 168 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 M0QX08 132 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 CCNKO75909 580 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 TSPAN9O75954 239 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 POP4O95707 220 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 GP2P55259 537 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 UGT8Q16880 541 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SNAP47Q5SQN1 464 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 Q6ZVU0 165 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 CHST14Q8NCH0 376 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 RORBQ92753 470 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SCAMP4Q969E2 229 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 DPH2Q9BQC3 489 aaPredicted RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 ASPSCR1Q9BZE9 553 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 DDX28Q9NUL7 540 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 PDP1Q9P0J1 537 aaPredicted RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 FBXO10Q9UK96 956 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 HS3ST2Q9Y278 367 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 SAMHD1Q9Y3Z3 626 aaKnown RBP10.6□□□□□ -0.71
NEIL1-202ENST00000561643 PMF1-BGLAPU3KQ54 211 aa10.6□□□□□ -0.71
NEIL1-202ENST00000561643 TRAV19A0A0A6YYK7 116 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 CENPBD1B2RD01 187 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 GFYI3L273 518 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SLC16A5O15375 505 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TBX1O43435 398 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SH3BGRLO75368 114 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 PARNO95453 639 aaKnown RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 KRT8P05787 483 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 PCMT1P22061 227 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 DAPP51397 102 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 VBP1P61758 197 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TUBA1BP68363 451 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MRPS15P82914 257 aaKnown RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 EMX1Q04741 257 aaPredicted RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 GBX1Q14549 363 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TUBA1AQ71U36 451 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ZZZ3Q8IYH5 903 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 CLECL1Q8IZS7 167 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ATG16L2Q8NAA4 619 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 VOPP1Q96AW1 172 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TRIM39Q9HCM9 518 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SCN3BQ9NY72 215 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 VPS29Q9UBQ0 182 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TPRKBQ9Y3C4 175 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 PPIL1Q9Y3C6 166 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 TESMINQ9Y4I5 508 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 OR2AG2A6NM03 316 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MEN1O00255 615 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 LEFTY2O00292 366 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 B3GALNT1O75752 331 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 DNAJB5O75953 348 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 KCNK5O95279 499 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 LRG1P02750 347 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 PCSK2P16519 638 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 DNAJA1P31689 397 aaKnown RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 KDELR2P33947 212 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 PFN3P60673 137 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SLC7A9P82251 487 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 VLDLRP98155 873 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ACSM2AQ08AH3 577 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MTAPQ13126 283 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 SF1Q15637 639 aaKnown RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ACSM2BQ68CK6 577 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ERICH5Q6P6B1 374 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 GATAD2AQ86YP4 633 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 CCDC103Q8IW40 242 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 HCAR2Q8TDS4 363 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MED8Q96G25 268 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 HSH2DQ96JZ2 352 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MAGEB10Q96LZ2 347 aaPredicted RBP10.59□□□□□ -0.71
NEIL1-202ENST00000561643 MYOCQ99972 504 aa10.59□□□□□ -0.71
NEIL1-202ENST00000561643 ZNF106Q9H2Y7 1883 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms