RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TCF12Q99081 682 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 FAM129AQ9BZQ8 928 aa17.42■□□□□ 0.38
TPM1-226ENST00000560959 HEATR5BQ9P2D3 2071 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 A0A1B0GTH9 108 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 OR2W5A6NFC9 320 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 H7BY64 318 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 PTGER1P34995 402 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 CYLC1P35663 651 aaPredicted RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 NAP1L1P55209 391 aaKnown RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 RHAGQ02094 409 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 FOLH1Q04609 750 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 TSTA3Q13630 321 aaPredicted RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 ABRAXAS2Q15018 415 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 KLHL38Q2WGJ6 581 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 ZNF468Q5VIY5 522 aaPredicted RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 MRNIPQ6NTE8 343 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 CEP128Q6ZU80 1094 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 PRSS41Q7RTY9 318 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 VN1R4Q7Z5H5 301 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 CD163Q86VB7 1156 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 TMEM200AQ86VY9 491 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 ZNF227Q86WZ6 799 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 LRRC56Q8IYG6 542 aaPredicted RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 ARMC10Q8N2F6 343 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 LRRC57Q8N9N7 239 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 TC2NQ8N9U0 490 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 C16orf52Q8NHV5 167 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 TM4SF19Q96DZ7 209 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 PRAP1Q96NZ9 151 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 TP63Q9H3D4 680 aaPredicted RBP17.41■□□□□ 0.38
TPM1-226ENST00000560959 ANKHQ9HCJ1 492 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 PLSCR2Q9NRY7 297 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 RNF6Q9Y252 685 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 HRH3Q9Y5N1 445 aa17.41■□□□□ 0.38
TPM1-226ENST00000560959 USP27XA6NNY8 438 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 KLRC4-KLRK1H3BQV0 150 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 SMAPO00193 183 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 AP3B1O00203 1094 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 TPOP07202 933 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 TPP2P29144 1249 aaPredicted RBP17.4■□□□□ 0.38
TPM1-226ENST00000560959 FMO4P31512 558 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 ST13P50502 369 aaKnown RBP17.4■□□□□ 0.38
TPM1-226ENST00000560959 HLCSP50747 726 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 MEF2AQ02078 507 aaPredicted RBP17.4■□□□□ 0.38
TPM1-226ENST00000560959 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 ACSBG2Q5FVE4 666 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 MEI1Q5TIA1 1274 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 PLD3Q8IV08 490 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 MMP21Q8N119 569 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 UBL4BQ8N7F7 174 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 CAMKVQ8NCB2 501 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 LPGAT1Q92604 370 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 FRMD8P1Q9BZ68 369 aaPredicted RBP17.4■□□□□ 0.38
TPM1-226ENST00000560959 IL22Q9GZX6 179 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 HCN3Q9P1Z3 774 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 KLHL42Q9P2K6 505 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 AMFRQ9UKV5 643 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 KLF13Q9Y2Y9 288 aaPredicted RBP17.4■□□□□ 0.38
TPM1-226ENST00000560959 SLC22A7Q9Y694 548 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 DUSP10Q9Y6W6 482 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 DNHD1Q96M86 4753 aa17.4■□□□□ 0.38
TPM1-226ENST00000560959 MIF4GDA9UHW6 222 aaKnown RBP17.39■□□□□ 0.37
TPM1-226ENST00000560959 SGK494L7N484 410 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 TFECO14948 347 aaPredicted RBP17.39■□□□□ 0.37
TPM1-226ENST00000560959 NIPSNAP2O75323 286 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 FOSL1P15407 271 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 IL1RNP18510 177 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 TFEBP19484 476 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 CHRM3P20309 590 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 OR4D2P58180 307 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 MLF1P58340 268 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 OASLQ15646 514 aaKnown RBP17.39■□□□□ 0.37
TPM1-226ENST00000560959 ARHGAP11AQ6P4F7 1023 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 ACAD11Q709F0 780 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 CLYBLQ8N0X4 340 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 SHISA5Q8N114 240 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 PPFIBP2Q8ND30 876 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 UCK2Q9BZX2 261 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 RAB6BQ9NRW1 208 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 LANCL2Q9NS86 450 aa17.39■□□□□ 0.37
TPM1-226ENST00000560959 MAP1AP78559 2803 aaPredicted RBP17.38■□□□□ 0.37
TPM1-226ENST00000560959 NKX2-6A6NCS4 301 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 GFYI3L273 518 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 PRMT3O60678 531 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 APRTP07741 180 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 KLK2P20151 261 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 ARNTP27540 789 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 SKIV2L2P42285 1042 aaKnown RBP17.38■□□□□ 0.37
TPM1-226ENST00000560959 NPY2RP49146 381 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 PPP2R2AP63151 447 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 REXO1L1PQ8IX06 675 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 MYRIPQ8NFW9 859 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 ASB11Q8WXH4 323 aa17.38■□□□□ 0.37
TPM1-226ENST00000560959 DRG1Q9Y295 367 aaKnown RBP17.38■□□□□ 0.37
TPM1-226ENST00000560959 PRRC2AP48634 2157 aaKnown RBP17.38■□□□□ 0.37
TPM1-226ENST00000560959 TCRBV7S2A1N4TA0A589 114 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 GRID2IPA4D2P6 1211 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 FCHO1O14526 889 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 KLK8O60259 260 aa17.37■□□□□ 0.37
TPM1-226ENST00000560959 ZWINTO95229 277 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms