RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 GLTPQ9NZD2 209 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 LRIT1Q9P2V4 623 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MALT1Q9UDY8 824 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 WARS2Q9UGM6 360 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ATXN7L1Q9ULK2 861 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SNX7Q9UNH6 387 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 LIPT1Q9Y234 373 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 VWA7Q9Y334 891 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PMF1-BGLAPU3KQ54 211 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PCM1Q15154 2024 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 LOC102723971A0A1B0GUV8 181 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 E7ENX8 843 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 M0R3G1 203 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CLIC2O15247 247 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SERPINI2O75830 405 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SEMA3DO95025 777 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SEC24AO95486 1093 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TDP2O95551 362 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GLP2RO95838 553 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MT-ATP6P00846 226 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 JUNP05412 331 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 S100A6P06703 90 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FGF4P08620 206 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GAAP10253 952 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MMP8P22894 467 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GJC1P36383 396 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OLR1P78380 273 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TAP1Q03518 808 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 INCA1Q0VD86 236 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TSTA3Q13630 321 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 QRICH1Q2TAL8 776 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 AARDQ4LEZ3 155 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 IFI44LQ53G44 452 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 LINC00696Q6ZRV3 163 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NOXA1Q86UR1 476 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FAM219AQ8IW50 185 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 DHRSXQ8N5I4 330 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FAM46DQ8NEK8 389 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OR7D4Q8NG98 312 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OR7A2PQ8NGA2 310 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 OR2T34Q8NGX1 318 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SLC22A8Q8TCC7 542 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MRPL38Q96DV4 380 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CDCA5Q96FF9 252 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 KCTD14Q9BQ13 255 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 BTBD2Q9BX70 525 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 COG4Q9H9E3 785 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 EFCAB1Q9HAE3 211 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ANKHQ9HCJ1 492 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FAM212BQ9NTI7 297 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CHRNA9Q9UGM1 479 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ANAPC2Q9UJX6 822 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FBXO5Q9UKT4 447 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF175Q9Y473 711 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP3A7-CYP3A51PA0A087WV96 503 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 H3BMM5 538 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GABARAPO95166 117 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 VNN1O95497 513 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TOP3BO95985 862 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 C1QAP02745 245 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 IFNA16P05015 189 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PSKH1P11801 424 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CBLP22681 906 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CYP3A7P24462 503 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GATA4P43694 442 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 IL24Q13007 206 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MFSD13AQ14CX5 517 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ATP6AP1Q15904 470 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 HIST2H2BCQ6DN03 193 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 HIST2H2BDQ6DRA6 164 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NAPEPLDQ6IQ20 393 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CORO6Q6QEF8 472 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF767PQ75MW2 155 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 GDPD3Q7L5L3 318 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 CAMKMTQ7Z624 323 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 IGDCC3Q8IVU1 814 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 DMRTC2Q8IXT2 367 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 AADATQ8N5Z0 425 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF655Q8N720 491 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 UXS1Q8NBZ7 420 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 KCTD4Q8WVF5 259 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 PROX1Q92786 737 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NKD2Q969F2 451 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FBXO32Q969P5 355 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ST6GALNAC6Q969X2 333 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FAM162AQ96A26 154 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MISP3Q96FF7 219 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 C16orf58Q96GQ5 468 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 MARK4Q96L34 752 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZNF578Q96N58 590 aaPredicted RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 TSNARE1Q96NA8 513 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NUDT22Q9BRQ3 303 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 C9orf16Q9BUW7 83 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 SEMA6CQ9H3T2 930 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 NTN4Q9HB63 628 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 FBRSL1Q9HCM7 1045 aaKnown RBP6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 ZC4H2Q9NQZ6 224 aa6.51□□□□□ -1.37
TSPAN3-209ENST00000560715 HSPB7Q9UBY9 170 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms