RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 VIPR2P41587 438 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 MAPK10P53779 464 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ITGA1P56199 1179 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 VBP1P61758 197 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SRSF11Q05519 484 aaKnown RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SCN1BQ07699 218 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SERINC3Q13530 473 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 VEZF1Q14119 521 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 GALNT3Q14435 633 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 PON2Q15165 354 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TEAD4Q15561 434 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 MAPK11Q15759 364 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TIGD6Q17RP2 521 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 CTU2Q2VPK5 515 aaKnown RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SIRPB2Q5JXA9 342 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ARMC4Q5T2S8 1044 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 MPP7Q5T2T1 576 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 STEAP3Q658P3 488 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 RAP1GAP2Q684P5 730 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ALG1LQ6GMV1 187 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 CCBE1Q6UXH8 406 aaPredicted RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF517Q6ZMY9 492 aaPredicted RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 Q6ZNB5 142 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 HTR3DQ70Z44 454 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TRIM46Q7Z4K8 759 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 MILR1Q7Z6M3 343 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 C14orf80Q86SX3 495 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ZNF605Q86T29 641 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ZSWIM9Q86XI8 627 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 PLCZ1Q86YW0 608 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SLC44A2Q8IWA5 706 aaPredicted RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SLC30A8Q8IWU4 369 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 STX19Q8N4C7 294 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ATG16L2Q8NAA4 619 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 VPS37AQ8NEZ2 397 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 CSGALNACT1Q8TDX6 532 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 UBTD2Q8WUN7 234 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 AP3S1Q92572 193 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 HTRA1Q92743 480 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 GTF2H4Q92759 462 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 MARVELD3Q96A59 401 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TESCQ96BS2 214 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SHDQ96IW2 340 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 Q96MT0 163 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TMEM74Q96NL1 305 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 PRRX2Q99811 253 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SLC30A2Q9BRI3 323 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 COPS4Q9BT78 406 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TRMT61BQ9BVS5 477 aaKnown RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ADGRE3Q9BY15 652 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 PLA2G2FQ9BZM2 168 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 RNF38Q9H0F5 515 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TP63Q9H3D4 680 aaPredicted RBP8.28□□□□□ -1.08
CCDC33-209ENST00000560565 CLMPQ9H6B4 373 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 TRPV4Q9HBA0 871 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ACSS2Q9NR19 701 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 EHD3Q9NZN3 535 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 KLHL42Q9P2K6 505 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 ERVK-18Q9QC07 812 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 SPASTQ9UBP0 616 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 POFUT2Q9Y2G5 429 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 PCDHGB3Q9Y5G1 929 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 KIAA1549LQ6ZVL6 1849 aa8.28□□□□□ -1.08
CCDC33-209ENST00000560565 UBA6A0AVT1 1052 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 IRGMA1A4Y4 181 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 C2orf78A6NCI8 922 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 HEPACAM2A8MVW5 462 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 FADS2P1A8MWK0 482 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 NPIPB8E9PQR5 432 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TMX2-CTNND1H3BSU7 103 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 GFRA2O00451 464 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 E2F3O00716 465 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 CAPN5O15484 640 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TBX1O43435 398 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 B4GAT1O43505 415 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TMCC2O75069 709 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SIX3O95343 332 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 FADS2O95864 444 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SRPRAP08240 638 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 G6PDP11413 515 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 SLC2A4P14672 509 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 DGKAP23743 735 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 FCARP24071 287 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 OR1E1P30953 314 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 MLLT3P42568 568 aaPredicted RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 ZFP36L2P47974 494 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 NUBP1P53384 320 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 MLLT10P55197 1068 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 MTPNP58546 118 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 CDC42P60953 191 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 PCDH1Q08174 1060 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 RAPSNQ13702 412 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 GTF2H2Q13888 395 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 DGCR6Q14129 220 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TSNQ15631 228 aaKnown RBP8.27□□□□□ -1.09
CCDC33-209ENST00000560565 NADSYN1Q6IA69 706 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 GTF2H2CQ6P1K8 395 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 NEK5Q6P3R8 708 aa8.27□□□□□ -1.09
CCDC33-209ENST00000560565 TMEM207Q6UWW9 146 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms