RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 CPNE1Q99829 537 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 PAIP2Q9BPZ3 127 aaKnown RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 ZBTB20Q9HC78 741 aaPredicted RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 UTP6Q9NYH9 597 aaKnown RBP12.93□□□□□ -0.34
SMAD3-214ENST00000560402 MOCS1Q9NZB8 636 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 SOX13Q9UN79 622 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 NTNG1Q9Y2I2 539 aa12.93□□□□□ -0.34
SMAD3-214ENST00000560402 MYO9AB2RTY4 2548 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 A0A0J9YVX5 310 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 A0A1W2PQ72 361 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 TRIM49D1C9J1S8 452 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 MASP2O00187 686 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 E2F3O00716 465 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 FAM155BO75949 473 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 MATN4O95460 622 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 ZGLP1P0C6A0 271 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 EDN3P14138 238 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 FBLP22087 321 aaKnown RBP12.92□□□□□ -0.34
SMAD3-214ENST00000560402 ARNTP27540 789 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 GP5P40197 560 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 OR1D4P47884 311 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 CCT5P48643 541 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 AP2B1P63010 937 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 CRADDP78560 199 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 KLC1Q07866 573 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 MFAP5Q13361 173 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 INAQ16352 499 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 PRTGQ2VWP7 1150 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 TTLL9Q3SXZ7 439 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 CCSMST1Q4G0I0 132 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 GRTP1Q5TC63 336 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 FRMPD2BQ6IN97 320 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 RPUSD3Q6P087 351 aaKnown RBP12.92□□□□□ -0.34
SMAD3-214ENST00000560402 TMEM151BQ8IW70 566 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 C4orf33Q8N1A6 199 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 METTL27Q8N6F8 245 aaPredicted RBP12.92□□□□□ -0.34
SMAD3-214ENST00000560402 OR9A1PQ8NGU1 263 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 DNAJB14Q8TBM8 379 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 STT3BQ8TCJ2 826 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 LRRC8CQ8TDW0 803 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 SMPDL3AQ92484 453 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 THOC3Q96J01 351 aaKnown RBP12.92□□□□□ -0.34
SMAD3-214ENST00000560402 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 C10orf90Q96M02 699 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 BIRC8Q96P09 236 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 TRIM56Q9BRZ2 755 aaKnown RBP12.92□□□□□ -0.34
SMAD3-214ENST00000560402 MKS1Q9NXB0 559 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 CSAG2Q9Y5P2 127 aa12.92□□□□□ -0.34
SMAD3-214ENST00000560402 ZGRF1Q86YA3 2104 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 E5RI56 91 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 MYO1CO00159 1063 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 NIPSNAP2O75323 286 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 ALOX12BO75342 701 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 SPAG7O75391 227 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 PSIP1O75475 530 aaKnown RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 VAPBO95292 243 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 CLDN1O95832 211 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 CATP04040 527 aaKnown RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 NEFHP12036 1026 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 SPRP35270 261 aaPredicted RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 SEC24CP53992 1094 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 CDC16Q13042 620 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 DSG2Q14126 1118 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 GARNL3Q5VVW2 1013 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 FAM180AQ6UWF9 173 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 TIFABQ6ZNK6 161 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 SHISA6Q6ZSJ9 500 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 NEK10Q6ZWH5 1172 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 KCNMB4Q86W47 210 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 PARP9Q8IXQ6 854 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 AGGF1Q8N302 714 aaeCLIP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 CCDC197Q8NCU1 140 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 FAR1Q8WVX9 515 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 MFSD3Q96ES6 412 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 CNDP1Q96KN2 507 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 LMF1Q96S06 567 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 DPH7Q9BTV6 452 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 MRPS30Q9NP92 439 aaKnown RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 INTS10Q9NVR2 710 aaKnown RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 C3orf18Q9UK00 162 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 RUVBL2Q9Y230 463 aaKnown RBP12.91□□□□□ -0.34
SMAD3-214ENST00000560402 MAU2Q9Y6X3 613 aa12.91□□□□□ -0.34
SMAD3-214ENST00000560402 DIDO1Q9BTC0 2240 aaKnown RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 CENPEQ02224 2701 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 NSG1A0A0A6YYJ2 146 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 ARHGEF33A8MVX0 844 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 TXNDC9O14530 226 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 TYROBPO43914 113 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 EIF2S1P05198 315 aaKnown RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 PKMP14618 531 aaKnown RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 EZRP15311 586 aaKnown RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 FMO4P31512 558 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 RPA3P35244 121 aaPredicted RBP12.9□□□□□ -0.34
SMAD3-214ENST00000560402 DCTP40126 519 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 ABATP80404 500 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 RELAQ04206 551 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 SLC18A2Q05940 514 aa12.9□□□□□ -0.34
SMAD3-214ENST00000560402 FASTKQ14296 549 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms