RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CABIN1Q9Y6J0 2220 aa5.02□□□□□ -1.61
SPG11-220ENST00000559933 ADAMTS20P59510 1910 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 COL27A1Q8IZC6 1860 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 GOLGA8QA0A0J9YX86 632 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 FEZF1A0PJY2 475 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 PIPSLA2A3N6 862 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 GOLGA8OA6NCC3 632 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 KLHL33A6NCF5 533 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 PABPN1LA6NDY0 278 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 C4orf47A7E2U8 309 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 RHPN2P1A8MT19 583 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ISM1B1AKI9 464 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 GOLGA8NF8WBI6 632 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 K7EPI3 171 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 HGSO14964 777 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 CLGNO14967 610 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 BIRC5O15392 142 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 EDF1O60869 148 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 KCNJ13O60928 360 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 LMNAP02545 664 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 SYPP08247 313 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ZNF806P0C7X5 589 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CD59P13987 128 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 XRCC1P18887 633 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 MAGP20916 626 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ALDH4A1P30038 563 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 GRIA3P42263 894 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 KIR3DL1P43629 444 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ST13P50502 369 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 NEK2P51955 445 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ATXN3P54252 364 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 AP1S2P56377 157 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 DAB2P98082 770 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CLCQ05315 142 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CYP4F3Q08477 520 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CDC16Q13042 620 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 LCP2Q13094 533 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 STX3Q13277 289 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 BIRC2Q13490 618 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 DOC2AQ14183 400 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 NR0B2Q15466 257 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SF1Q15637 639 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 ZIC1Q15915 447 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 KCNMB1Q16558 191 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CYP2A13Q16696 494 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SLC9B1Q4ZJI4 515 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SGO1Q5FBB7 561 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 XKR6Q5GH73 641 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SNAP47Q5SQN1 464 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 KIAA1614Q5VZ46 1190 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ANKS6Q68DC2 871 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SLC6A19Q695T7 634 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CAPN13Q6MZZ7 669 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 IRGCQ6NXR0 463 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 TTC23LQ6PF05 361 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 IL27RAQ6UWB1 636 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 FAM92BQ6ZTR7 304 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 C22orf34Q6ZV56 151 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 LRRC70Q7Z2Q7 622 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 EFL1Q7Z2Z2 1120 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 ADCK2Q7Z695 626 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SLC22A9Q8IVM8 553 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SDR16C5Q8N3Y7 309 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 FBXO15Q8NCQ5 510 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 OR4F6Q8NGB9 312 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 OR2L8Q8NGY9 312 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 PPP4R1Q8TF05 950 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SETD7Q8WTS6 366 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 SMPDL3AQ92484 453 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 RAD51AP1Q96B01 352 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SH3KBP1Q96B97 665 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 MTFMTQ96DP5 389 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 LOXL4Q96JB6 756 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 CNDP2Q96KP4 475 aaKnown RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 MARK4Q96L34 752 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 TGM7Q96PF1 710 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ZNF317Q96PQ6 595 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 TRAPPC9Q96Q05 1148 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 OR2A14Q96R47 310 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SLC38A3Q99624 504 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 EBF4Q9BQW3 602 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 SGPP1Q9BX95 441 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 DRC3Q9H069 523 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ABCG4Q9H172 646 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 TUBB1Q9H4B7 451 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 IPPKQ9H8X2 491 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 PRDM7Q9NQW5 492 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 DNAJC11Q9NVH1 559 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ACTR10Q9NZ32 417 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 MID2Q9UJV3 735 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 PADI4Q9UM07 663 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ANGPTL3Q9Y5C1 460 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 HEBP2Q9Y5Z4 205 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 COLEC10Q9Y6Z7 277 aa5.01□□□□□ -1.61
SPG11-220ENST00000559933 ZFHX2Q9C0A1 2572 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 EP300Q09472 2414 aaPredicted RBP5.01□□□□□ -1.61
SPG11-220ENST00000559933 GOLGA4Q13439 2230 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 ASCC3Q8N3C0 2202 aaKnown RBP5□□□□□ -1.61
SPG11-220ENST00000559933 RP1P56715 2156 aa5□□□□□ -1.61
SPG11-220ENST00000559933 IGHV1OR21-1A0A087WYE8 117 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms