RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 PDK1Q15118 436 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CHRNA6Q15825 494 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 LRRC36Q1X8D7 754 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 SIRPB2Q5JXA9 342 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 PRAMEF17Q5VTA0 474 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CACHD1Q5VU97 1274 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 FAM69BQ5VUD6 431 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 LIPMQ5VYY2 423 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CPZQ66K79 652 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 DUS1LQ6P1R4 473 aaKnown RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 PRMT9Q6P2P2 845 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 ZYG11AQ6WRX3 759 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 ZCCHC23Q6ZST2 131 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 ASB18Q6ZVZ8 466 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 PIWIL4Q7Z3Z4 852 aaKnown RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 CARM1Q86X55 608 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 RASGRP3Q8IV61 690 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 FAM26EQ8N5C1 309 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 POU5F2Q8N7G0 328 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 BEND7Q8N7W2 519 aaPredicted RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.66□□□□□ -1.5
USP3-212ENST00000559276 DDHD1Q8NEL9 900 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 ZFP28Q8NHY6 868 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 PNPT1Q8TCS8 783 aaKnown RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 ADAMTS17Q8TE56 1095 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CCDC126Q96EE4 140 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 INSM2Q96T92 566 aaPredicted RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 VAT1Q99536 393 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 MAP3K3Q99759 626 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 TRIM56Q9BRZ2 755 aaKnown RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 ANKRD60Q9BZ19 345 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 GPR63Q9BZJ6 419 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 MUC13Q9H3R2 512 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 ACTL8Q9H568 366 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 WDR41Q9HAD4 459 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 UGT1A7Q9HAW7 530 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 UGT1A10Q9HAW8 530 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 UGT1A8Q9HAW9 530 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CLK4Q9HAZ1 481 aaKnown RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 ZBTB26Q9HCK0 441 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 PRM3Q9NNZ6 103 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 SNX15Q9NRS6 342 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 RAD18Q9NS91 495 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 FAIMQ9NVQ4 179 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 OXSMQ9NWU1 459 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 UBAP1Q9NZ09 502 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 IL17CQ9P0M4 197 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.66□□□□□ -1.5
USP3-212ENST00000559276 PADI1Q9ULC6 663 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CDYLQ9Y232 598 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 POLHQ9Y253 713 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 SH3GLB1Q9Y371 365 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 CEPT1Q9Y6K0 416 aa5.66□□□□□ -1.5
USP3-212ENST00000559276 PRRC2CQ9Y520 2896 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 UNC79Q9P2D8 2635 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 FER1L5A0AVI2 2057 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 A0A096LPK6 155 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PIPSLA2A3N6 862 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 CCDC162PA2VCL2 907 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 BLACEA4D250 179 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 OR5K3A6NET4 321 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 CCDC160A6NGH7 325 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 OR2AG2A6NM03 316 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 BBIP1A8MTZ0 92 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 C21orf140B9A014 251 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 H3BNH8 94 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 MKRN2OSH3BPM6 223 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 HNRNPRO43390 633 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 ZBTB14O43829 449 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ABCB7O75027 752 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 SEMA7AO75326 666 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 LYPLA1O75608 230 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CEACAM4O75871 244 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PIAS1O75925 651 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 SORBS2O94875 1100 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 METTL18O95568 372 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ESRRBO95718 433 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 EIF2S1P05198 315 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 FCGR1AP12314 374 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 BMP2P12643 396 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF26P17031 533 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 NFKB1P19838 968 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 GNLYP22749 145 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 HMOX2P30519 316 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 SLC7A1P30825 629 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 NPY2RP49146 381 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 EMP3P54852 163 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 WNT3AP56704 352 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 DNAJB13P59910 316 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 PHEXP78562 749 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 GALNT1Q10472 559 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 CHAF1BQ13112 559 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 TRIM25Q14258 630 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 GPR19Q15760 415 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 UGT8Q16880 541 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ZBED5Q49AG3 693 aa5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF658BQ4V348 819 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 PDCD4Q53EL6 469 aaKnown RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 PRR30Q53SZ7 412 aaPredicted RBP5.65□□□□□ -1.5
USP3-212ENST00000559276 ZNF789Q5FWF6 425 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms