RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ATG9BQ674R7 924 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 TMEM214Q6NUQ4 689 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 KLC3Q6P597 504 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 RPS27LQ71UM5 84 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 LRRC70Q7Z2Q7 622 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 VN1R5Q7Z5H4 357 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 SYVN1Q86TM6 617 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 PDSS2Q86YH6 399 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 PTGR2Q8N8N7 351 aaPredicted RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 OR9A4Q8NGU2 314 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 SLC13A3Q8WWT9 602 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 CAVIN3Q969G5 261 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 MTBPQ96DY7 904 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 THAP11Q96EK4 314 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 SPSB2Q99619 263 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 AIF1LQ9BQI0 150 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 CNOT10Q9H9A5 744 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 ACSS2Q9NR19 701 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 PTRH2Q9Y3E5 179 aaKnown RBP17.78■□□□□ 0.44
CASC4-209ENST00000559222 IGSF10Q6WRI0 2623 aa17.78■□□□□ 0.44
CASC4-209ENST00000559222 IQANK1A0A1B0GTG1 560 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 SYCE1LA8MT33 242 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 K7EPI3 171 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 MASP2O00187 686 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 DNAJB6O75190 326 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 SERPIND1P05546 499 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 PYGBP11216 843 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 GNAZP19086 355 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 GRK3P35626 688 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 EFNA3P52797 238 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 EMP3P54852 163 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 CHAF1BQ13112 559 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 NKG7Q16617 165 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 UGT8Q16880 541 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 CPZQ66K79 652 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 SH2D5Q6ZV89 423 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 OVCH1Q7RTY7 1134 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 PRSS58Q8IYP2 241 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 TEX9Q8N6V9 391 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 EXD3Q8N9H8 876 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 CREB3L4Q8TEY5 395 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 PHF21BQ96EK2 531 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 MMABQ96EY8 250 aaPredicted RBP17.77■□□□□ 0.44
CASC4-209ENST00000559222 SEMA4CQ9C0C4 833 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 DRC3Q9H069 523 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 KLHL31Q9H511 634 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 SOX17Q9H6I2 414 aaPredicted RBP17.77■□□□□ 0.44
CASC4-209ENST00000559222 ZNF304Q9HCX3 659 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 GPRC5BQ9NZH0 403 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 OPTCQ9UBM4 332 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 GPN3Q9UHW5 284 aaPredicted RBP17.77■□□□□ 0.44
CASC4-209ENST00000559222 RAB21Q9UL25 225 aa17.77■□□□□ 0.44
CASC4-209ENST00000559222 SCN2AQ99250 2005 aa17.77■□□□□ 0.43
CASC4-209ENST00000559222 ZNF860A6NHJ4 632 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 SGK494L7N484 410 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 TBX6O95947 436 aaPredicted RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 FAM87AP0C7U9 286 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 COL6A2P12110 1019 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 FBLP22087 321 aaKnown RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 OTX2P32243 289 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 ALDH18A1P54886 795 aaKnown RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 RHDQ02161 417 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 CHIT1Q13231 466 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 LY6DQ14210 128 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 TSNAXIP1Q2TAA8 658 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 XKR6Q5GH73 641 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 LGSNQ5TDP6 509 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 GARNL3Q5VVW2 1013 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 EMBQ6PCB8 327 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 TDRPQ86YL5 185 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 CAMKVQ8NCB2 501 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 NT5CQ8TCD5 201 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 COL26A1Q96A83 441 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 FKBP10Q96AY3 582 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 ZBTB9Q96C00 473 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 NSUN5Q96P11 429 aaKnown RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 C12orf65Q9H3J6 166 aaKnown RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 ZFP69BQ9UJL9 534 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 EMCNQ9ULC0 261 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 ZNF490Q9ULM2 529 aaPredicted RBP17.76■□□□□ 0.43
CASC4-209ENST00000559222 MED13Q9UHV7 2174 aa17.76■□□□□ 0.43
CASC4-209ENST00000559222 CLGNO14967 610 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 RBP1P09455 135 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 NUDT17P0C025 328 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 ZNF888P0CJ79 500 aaPredicted RBP17.75■□□□□ 0.43
CASC4-209ENST00000559222 EEF1DP29692 281 aaKnown RBP17.75■□□□□ 0.43
CASC4-209ENST00000559222 HNF4AP41235 474 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 FOLR3P41439 243 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 MC1RQ01726 317 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 ATP1A4Q13733 1029 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 DSG2Q14126 1118 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 CRTC2Q53ET0 693 aaPredicted RBP17.75■□□□□ 0.43
CASC4-209ENST00000559222 SOWAHCQ53LP3 525 aaPredicted RBP17.75■□□□□ 0.43
CASC4-209ENST00000559222 VWA2Q5GFL6 755 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 PRMT9Q6P2P2 845 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 GOLGA7Q7Z5G4 137 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 RNF175Q8N4F7 328 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 OR2Y1Q8NGV0 311 aa17.75■□□□□ 0.43
CASC4-209ENST00000559222 WDR34Q96EX3 536 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms