RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CREB3L4Q8TEY5 395 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 THAP11Q96EK4 314 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 FCRL4Q96PJ5 515 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 OR2A5Q96R48 311 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 GFM1Q96RP9 751 aaKnown RBP17.3■□□□□ 0.36
CLPX-203ENST00000558958 AKTIPQ9H8T0 292 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 FAM60AQ9NP50 221 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 TCF7L2Q9NQB0 619 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 RIC8BQ9NVN3 520 aa17.3■□□□□ 0.36
CLPX-203ENST00000558958 A0A0J9YVX5 310 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 CLEC3AO75596 197 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 TBX6O95947 436 aaPredicted RBP17.29■□□□□ 0.36
CLPX-203ENST00000558958 LIMK1P53667 647 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 CYP4F2P78329 520 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 TUBB3Q13509 450 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 IMPG1Q17R60 797 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 LSM12Q3MHD2 195 aaKnown RBP17.29■□□□□ 0.36
CLPX-203ENST00000558958 SNAP47Q5SQN1 464 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 VN1R4Q7Z5H5 301 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 DNAJC22Q8N4W6 341 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 TRPV3Q8NET8 790 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 CEP70Q8NHQ1 597 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 TUBGCP3Q96CW5 907 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 CCDC28BQ9BUN5 200 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 SYNDIG1Q9H7V2 258 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 ARL2BPQ9Y2Y0 163 aa17.29■□□□□ 0.36
CLPX-203ENST00000558958 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.28■□□□□ 0.36
CLPX-203ENST00000558958 NPIPB8E9PQR5 432 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 LSM1O15116 133 aaKnown RBP17.28■□□□□ 0.36
CLPX-203ENST00000558958 RSL1D1O76021 490 aaKnown RBP17.28■□□□□ 0.36
CLPX-203ENST00000558958 ETHE1O95571 254 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 PRR35P0CG20 571 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 PRPH2P23942 346 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 NR6A1Q15406 480 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 TERF2Q15554 542 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 KMT5CQ86Y97 462 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 CCDC197Q8NCU1 140 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 KLHL6Q8WZ60 621 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 CMTM7Q96FZ5 175 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 SLC41A2Q96JW4 573 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 RILPQ96NA2 401 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 MS4A8Q9BY19 250 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 ZNF768Q9H5H4 540 aaKnown RBP17.28■□□□□ 0.36
CLPX-203ENST00000558958 PDE7BQ9NP56 450 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 VPS29Q9UBQ0 182 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 GIMAP2Q9UG22 337 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
CLPX-203ENST00000558958 LOC105369274A0A096LPK9 316 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 LOC102723532A0A0G2JNH3 316 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 IGHV5-10-1A0A0J9YXX1 117 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 A8MU76 341 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 D6RAR5 112 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 HCRTR1O43613 425 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 PEX11AO75192 247 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 TGFB1P01137 390 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ANKRD34CP0C6C1 535 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 THRAP10827 490 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 PTX3P26022 381 aaPredicted RBP17.27■□□□□ 0.36
CLPX-203ENST00000558958 GABRA4P48169 554 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 HSD11B2P80365 405 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ILKQ13418 452 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ATP6AP1LQ52LC2 224 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ZC3H12BQ5HYM0 836 aaKnown RBP17.27■□□□□ 0.36
CLPX-203ENST00000558958 C6orf136Q5SQH8 315 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 NXNQ6DKJ4 435 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 FRMPD2BQ6IN97 320 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ARHGAP22Q7Z5H3 698 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 OR4N4Q8N0Y3 316 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 ANKS4BQ8N8V4 417 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 WDR48Q8TAF3 677 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 SLC13A3Q8WWT9 602 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 TM4SF19Q96DZ7 209 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 PPP3R2Q96LZ3 170 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 SERPINI1Q99574 410 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 OR51B5Q9H339 312 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 PRM3Q9NNZ6 103 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 SOHLH2Q9NX45 425 aa17.27■□□□□ 0.36
CLPX-203ENST00000558958 H0YGG7 62 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 NDUFS4O43181 175 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 MAP3K7O43318 606 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 SERPINA6P08185 405 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 LBPP18428 481 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 NELFEP18615 380 aaKnown RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 SEPHS1P49903 392 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 ARF3P61204 181 aaPredicted RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 GABPB1Q06547 395 aaPredicted RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 HYAL2Q12891 473 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 PWP1Q13610 501 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 CUL3Q13618 768 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 SPIDRQ14159 915 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 AP5B1Q2VPB7 878 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 GALNTL6Q49A17 601 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 SPDYAQ5MJ70 313 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 DEPDC1Q5TB30 811 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 OGFOD2Q6N063 350 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 GLRX5Q86SX6 157 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 ASPGQ86U10 573 aa17.26■□□□□ 0.35
CLPX-203ENST00000558958 MCATQ8IVS2 390 aaKnown RBP17.26■□□□□ 0.35
CLPX-203ENST00000558958 SLITRK4Q8IW52 837 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms