RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ATP1B1P05026 303 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 CD59P13987 128 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 CPA3P15088 417 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 IL10P22301 178 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 SERPINB6P35237 376 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 NKX2-1P43699 371 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 DLX5P56178 289 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ARL16Q0P5N6 197 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 C17orf67Q0P5P2 114 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ABRQ12979 859 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 LCP2Q13094 533 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 LASP1Q14847 261 aaKnown RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 P2RY6Q15077 328 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 GPR33Q49SQ1 333 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 PM20D1Q6GTS8 502 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ZNF770Q6IQ21 691 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 C18orf65Q6ZTR6 163 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 TOM1L2Q6ZVM7 507 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 PRSS42Q7Z5A4 293 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 AQP12AQ8IXF9 295 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 GPC2Q8N158 579 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 KLHDC1Q8N7A1 406 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 RNF149Q8NC42 400 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 OR10V1Q8NGI7 309 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ULK4Q96C45 1275 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 NAP1L3Q99457 506 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 NKX3-1Q99801 234 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 ALKBH7Q9BT30 221 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 SPXQ9BT56 116 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 TRIM7Q9C029 511 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 MAGEF1Q9HAY2 307 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 SIX2Q9NPC8 291 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 PHPT1Q9NRX4 125 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 TBC1D13Q9NVG8 400 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.96□□□□□ -1.78
CASC4-206ENST00000558847 FBXL4Q9UKA2 621 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 PRDM4Q9UKN5 801 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 KCNJ14Q9UNX9 436 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 C2CD2Q9Y426 696 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 SELENOKQ9Y6D0 94 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 COLEC10Q9Y6Z7 277 aa3.96□□□□□ -1.78
CASC4-206ENST00000558847 NPHP3Q7Z494 1330 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 TRBV2A0A0J9YWF9 115 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 SMIM30A4D0T7 59 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 E5RGE8 158 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 M0R296 226 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 TEX28O15482 410 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 PTMAP06454 111 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 FERP16591 822 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 ELAVL4P26378 380 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 RBMS1P29558 406 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 SQLEQ14534 574 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 RBBP5Q15291 538 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 PTPN14Q15678 1187 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 TATDN1Q6P1N9 297 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 CNSTQ6PJW8 725 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 CD164L2Q6UWJ8 174 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 SH2D5Q6ZV89 423 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 SLC24A5Q71RS6 500 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 ZNF771Q7L3S4 317 aaPredicted RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 SLC16A9Q7RTY1 509 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 CPEB2Q7Z5Q1 589 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 TMEM126BQ8IUX1 230 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 GPRC5AQ8NFJ5 357 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 OLIG1Q8TAK6 271 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 ST7LQ8TDW4 575 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 ZNRF4Q8WWF5 429 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 HPSE2Q8WWQ2 592 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 RBM41Q96IZ5 413 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 PRMT1Q99873 361 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 CCDC3Q9BQI4 270 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 FAM213AQ9BRX8 229 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 LRRC2Q9BYS8 371 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 OSBPL8Q9BZF1 889 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 INTS9Q9NV88 658 aaKnown RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 C2orf42Q9NWW7 574 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 CYP39A1Q9NYL5 469 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 AKAP7Q9P0M2 348 aaPredicted RBP3.95□□□□□ -1.78
CASC4-206ENST00000558847 ODF2LQ9ULJ1 636 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 NSG2Q9Y328 171 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 PCDHGA1Q9Y5H4 931 aa3.95□□□□□ -1.78
CASC4-206ENST00000558847 MAGEB16A2A368 324 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 NKX6-3A6NJ46 265 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 FAM157CP0CG43 387 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 SLC2A2P11168 524 aaPredicted RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 TYMPP19971 482 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 AADACP22760 399 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 GCNT1Q02742 428 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 SRSF9Q13242 221 aaKnown RBP eCLIP3.94□□□□□ -1.78
CASC4-206ENST00000558847 RBM39Q14498 530 aaKnown RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 SMC1AQ14683 1233 aaKnown RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 TTC31Q49AM3 519 aaPredicted RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 GTDC1Q4AE62 458 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 XKR3Q5GH77 459 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 PRAMEF8Q5VWM4 474 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 ZNF790Q6PG37 636 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 C15orf52Q6ZUT6 534 aaKnown RBP3.94□□□□□ -1.78
CASC4-206ENST00000558847 USP43Q70EL4 1123 aa3.94□□□□□ -1.78
CASC4-206ENST00000558847 MIER3Q7Z3K6 550 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms