RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 TM4SF19Q96DZ7 209 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 PHF21BQ96EK2 531 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 MVB12AQ96EY5 273 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 DRC3Q9H069 523 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 EHD1Q9H4M9 534 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 ZNF304Q9HCX3 659 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 SLC22A11Q9NSA0 550 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 GEMIN8Q9NWZ8 242 aaKnown RBP11.76□□□□□ -0.53
SMAD3-205ENST00000558428 ZFP69BQ9UJL9 534 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 TCFL5Q9UL49 500 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 TMCO1Q9UM00 188 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 CDC14AQ9UNH5 594 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 MRPS2Q9Y399 296 aaKnown RBP11.76□□□□□ -0.53
SMAD3-205ENST00000558428 ANGPTL3Q9Y5C1 460 aa11.76□□□□□ -0.53
SMAD3-205ENST00000558428 A0A0A6YYC8 382 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 CDC14CA4D256 554 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 LRRC14BA6NHZ5 514 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 FOXO6A8MYZ6 492 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 I3L1I5 382 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 FOXS1O43638 330 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PRAMEF4O60810 478 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 ONECUT2O95948 504 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 RECKO95980 971 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 EPB42P16452 691 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 EPORP19235 508 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 FBLP22087 321 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 AHRP35869 848 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 FOLR3P41439 243 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 IRF8Q02556 426 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 RGS1Q08116 209 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 CHIT1Q13231 466 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 IL10RAQ13651 578 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 FAM53BQ14153 422 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 DOC2AQ14183 400 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 RASA2Q15283 850 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PCBP2Q15366 365 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■■ 27.4
SMAD3-205ENST00000558428 UGT8Q16880 541 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PRAMEF9Q5VWM5 478 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TMEM214Q6NUQ4 689 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 MRPL14Q6P1L8 145 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TMIGD1Q6UXZ0 262 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 OVCH1Q7RTY7 1134 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 LCA5Q86VQ0 697 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 MREGQ8N565 214 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TEX9Q8N6V9 391 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 ANKRD53Q8N9V6 530 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 KCT2Q8NC54 265 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TRPV3Q8NET8 790 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TTLQ8NG68 377 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 MOCOSQ96EN8 888 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PTCD3Q96EY7 689 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 MMABQ96EY8 250 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 CATSPER2Q96P56 530 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 EFCAB11Q9BUY7 163 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TMEM216Q9P0N5 145 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PTRH2Q9Y3E5 179 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
SMAD3-205ENST00000558428 SCN2AQ99250 2005 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 MED13Q9UHV7 2174 aa11.75□□□□□ -0.53
SMAD3-205ENST00000558428 PRPF4O43172 522 aaKnown RBP eCLIP11.74□□□□□ -0.531e-11■□□□□ 11.3
SMAD3-205ENST00000558428 CNOT3O75175 753 aaKnown RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 KLF7O75840 302 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 SIX3O95343 332 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 ALBP02768 609 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 GSTA1P08263 222 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 FURINP09958 794 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 IL1RNP18510 177 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 EEF1DP29692 281 aaKnown RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 AVPR1BP47901 424 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 FOXL2P58012 376 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 SNRPNP63162 240 aaKnown RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 LAPTM5Q13571 262 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 PWP1Q13610 501 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 GTF2H2Q13888 395 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 TBCCQ15814 346 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 HIST2H2ACQ16777 129 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 DEFB109BQ30KR1 87 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 PAGE2BQ5JRK9 111 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 HIST2H2AA3Q6FI13 130 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 GTF2H2CQ6P1K8 395 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 GOLGA7Q7Z5G4 137 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 RIBC1Q8N443 379 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 OR9A4Q8NGU2 314 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 NT5CQ8TCD5 201 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 CCT6BQ92526 530 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 EXTL1Q92935 676 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 YIPF2Q9BWQ6 316 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 PITHD1Q9GZP4 211 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 NT5DC2Q9H857 520 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 ANKHQ9HCJ1 492 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 PRM3Q9NNZ6 103 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 CTSFQ9UBX1 484 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 ZNF282Q9UDV7 671 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-205ENST00000558428 DCDC2Q9UHG0 476 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 POLHQ9Y253 713 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 PLAAQ9Y263 795 aa11.74□□□□□ -0.53
SMAD3-205ENST00000558428 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms