RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 ANKHQ9HCJ1 492 aa16.74■□□□□ 0.27
TSPAN3-204ENST00000558394 ST6GALNAC2Q9UJ37 374 aa16.74■□□□□ 0.27
TSPAN3-204ENST00000558394 TCAF1Q9Y4C2 921 aa16.74■□□□□ 0.27
TSPAN3-204ENST00000558394 MAP1AP78559 2803 aaPredicted RBP16.74■□□□□ 0.27
TSPAN3-204ENST00000558394 FAM237BA0A1B0GVD1 139 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 SYCE3A1L190 88 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 ARHGEF33A8MVX0 844 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 SGK494L7N484 410 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 MYO1CO00159 1063 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 SMAPO00193 183 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 FCHO1O14526 889 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 HS6ST1O60243 411 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 CDC123O75794 336 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 TFEBP19484 476 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 RPS3P23396 243 aaKnown RBP eCLIP16.73■□□□□ 0.274e-7■■■□□ 17.2
TSPAN3-204ENST00000558394 TPP2P29144 1249 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 BCL6P41182 706 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 ITGA8P53708 1063 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 GDF10P55107 478 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 SLC26A5P58743 744 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PMPCAQ10713 525 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 ZNF468Q5VIY5 522 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 AADACL2Q6P093 401 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 ARHGAP11AQ6P4F7 1023 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PAOXQ6QHF9 649 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PRSS41Q7RTY9 318 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PCGF5Q86SE9 256 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 CNGA4Q8IV77 575 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 MPP5Q8N3R9 675 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PPFIBP2Q8ND30 876 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PLPP5Q8NEB5 264 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 OR5M3Q8NGP4 307 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 OR10Q1Q8NGQ4 319 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 PANX2Q96RD6 677 aa16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 MARCH4Q9P2E8 410 aaPredicted RBP16.73■□□□□ 0.27
TSPAN3-204ENST00000558394 DNHD1Q96M86 4753 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 PFDN6O15212 129 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 KLK8O60259 260 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 KIF5CO60282 957 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 SYF2O95926 243 aaKnown RBP16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 CHRM3P20309 590 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 IL10P22301 178 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 ATP5DP30049 168 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 RFC3P40938 356 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 DGKQP52824 942 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 RPS15AP62244 130 aaKnown RBP16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 SPA17Q15506 151 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 FAM136AQ96C01 138 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 RMND5BQ96G75 393 aaPredicted RBP16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 SEC16BQ96JE7 1060 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 PKP4Q99569 1192 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 RBCK1Q9BYM8 510 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 SLC6A16Q9GZN6 736 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 PCDHA13Q9Y5I0 950 aa16.72■□□□□ 0.27
TSPAN3-204ENST00000558394 MAGEB17A8MXT2 336 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 H3BMM5 538 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 H7BY64 318 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 PDE9AO76083 593 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 FMO4P31512 558 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 FDFT1P37268 417 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 HLCSP50747 726 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 SULF2Q8IWU5 870 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 CAMKVQ8NCB2 501 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 ZCCHC10Q8TBK6 192 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 ELP5Q8TE02 316 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 PEX11GQ96HA9 241 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 CALR3Q96L12 384 aaKnown RBP16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 PRAP1Q96NZ9 151 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 ETNK1Q9HBU6 452 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 TFR2Q9UP52 801 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 HRH3Q9Y5N1 445 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 DUSP10Q9Y6W6 482 aa16.71■□□□□ 0.27
TSPAN3-204ENST00000558394 PEX1O43933 1283 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 RDH16O75452 317 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 PSIP1O75475 530 aaKnown RBP16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 CTAG2O75638 210 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC16A8O95907 504 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 HRH2P25021 359 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 GRIA1P42261 906 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 NUP107P57740 925 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 MLF1P58340 268 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 RHAGQ02094 409 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 LTBQ06643 244 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 KLHL38Q2WGJ6 581 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 SDCCAG8Q86SQ7 713 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 VSTM4Q8IW00 320 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 CYP4X1Q8N118 509 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 KIF2BQ8N4N8 673 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 GOT1L1Q8NHS2 421 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 C16orf52Q8NHV5 167 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 TSLPQ969D9 159 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 THAP11Q96EK4 314 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 OR1F2PQ96R84 312 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 CLEC4MQ9H2X3 399 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 TRIM45Q9H8W5 580 aaPredicted RBP16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 CHRAC1Q9NRG0 131 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 TMEM184CQ9NVA4 438 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 PLEKHA6Q9Y2H5 1048 aa16.7■□□□□ 0.26
TSPAN3-204ENST00000558394 DNAJC13O75165 2243 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms