RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 PPM1NQ8N819 430 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 ZNF454Q8N9F8 522 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 TEX19Q8NA77 164 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 C7orf57Q8NEG2 295 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 STAG3L4Q8TBR4 150 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 METTL21AQ8WXB1 218 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 UBE2E3Q969T4 207 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 CCDC77Q9BR77 488 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 ING2Q9H160 280 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 CLK4Q9HAZ1 481 aaKnown RBP8.27□□□□□ -1.09
USP3-208ENST00000558285 ANKHQ9HCJ1 492 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 MKKSQ9NPJ1 570 aaPredicted RBP8.27□□□□□ -1.09
USP3-208ENST00000558285 ATP13A2Q9NQ11 1180 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 STARD5Q9NSY2 213 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 GRHL1Q9NZI5 618 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 GALPQ9UBC7 116 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 DHCR7Q9UBM7 475 aaKnown RBP8.27□□□□□ -1.09
USP3-208ENST00000558285 C19orf25Q9UFG5 118 aaPredicted RBP8.27□□□□□ -1.09
USP3-208ENST00000558285 MED16Q9Y2X0 877 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 OARD1Q9Y530 152 aa8.27□□□□□ -1.09
USP3-208ENST00000558285 A0A1W2PPV9 198 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CCT8L1PA6NM43 557 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 H0YGG7 62 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 H0YIG0 161 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 H7BY64 318 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 KRT38O76015 456 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 LINGO3P0C6S8 592 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ICAM2P13598 275 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GNAZP19086 355 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PSMB5P28074 263 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GABRB3P28472 473 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ARF3P61204 181 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 KLRB1Q12918 225 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 LAPTM5Q13571 262 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PWP1Q13610 501 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 FASTKQ14296 549 aaKnown RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 HIST2H2ACQ16777 129 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 HIST2H2AA3Q6FI13 130 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SULT1C3Q6IMI6 304 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ZNF425Q6IV72 752 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ABHD13Q7L211 337 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PRICKLE2Q7Z3G6 844 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ASPGQ86U10 573 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GPSM1Q86YR5 675 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 RELL1Q8IUW5 271 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 TRPV3Q8NET8 790 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SLC5A11Q8WWX8 675 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 IFT81Q8WYA0 676 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PWWP2AQ96N64 755 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PRAP1Q96NZ9 151 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GPR22Q99680 433 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SLC30A3Q99726 388 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 LRRC1Q9BTT6 524 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CCDC28BQ9BUN5 200 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SGPP1Q9BX95 441 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PELI2Q9HAT8 420 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 TMBIM4Q9HC24 238 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 WWOXQ9NZC7 414 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 GPRC5BQ9NZH0 403 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 C5AR2Q9P296 337 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 BAIAP2L1Q9UHR4 511 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 TMCO1Q9UM00 188 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 KLHL20Q9Y2M5 609 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ACOT9Q9Y305 439 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 MRPS18BQ9Y676 258 aaKnown RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 TRBC2A0A5B9 178 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ARGFXA6NJG6 315 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SLC28A2O43868 658 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CTSVO60911 334 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SMIM24O75264 130 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SKAP2O75563 359 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 GUCA1CO95843 209 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 WT1P19544 449 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 JAK1P23458 1154 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 F8A1P23610 371 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 MMP11P24347 488 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PIK3CGP48736 1102 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 TAS2R39P59534 338 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PHEXP78562 749 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 MEF2AQ02078 507 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 GUCY1A3Q02108 690 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 AIMP2Q13155 320 aaKnown RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 FASTKD3Q14CZ7 662 aaKnown RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 NR6A1Q15406 480 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 LINC00303Q3SY05 128 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 KBTBD12Q3ZCT8 623 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ASB18Q6ZVZ8 466 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 FAM20CQ8IXL6 584 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 ZNF843Q8N446 348 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 SLC38A9Q8NBW4 561 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CCDC197Q8NCU1 140 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 PPFIBP2Q8ND30 876 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 OR56A3Q8NH54 315 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 FBF1Q8TES7 1133 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 MMABQ96EY8 250 aaPredicted RBP8.26□□□□□ -1.09
USP3-208ENST00000558285 ZNF570Q96NI8 536 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CENPKQ9BS16 269 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 CRB3Q9BUF7 120 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 YIPF3Q9GZM5 350 aa8.26□□□□□ -1.09
USP3-208ENST00000558285 IQCGQ9H095 443 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms