RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ATP6V1E2Q96A05 226 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 CCDC126Q96EE4 140 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 C10orf90Q96M02 699 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 NSUN5Q96P11 429 aaKnown RBP24.35■■□□□ 1.49
SMAD6-202ENST00000557916 DPH2Q9BQC3 489 aaPredicted RBP24.35■■□□□ 1.49
SMAD6-202ENST00000557916 CHST8Q9H2A9 424 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 NOL11Q9H8H0 719 aaKnown RBP24.35■■□□□ 1.49
SMAD6-202ENST00000557916 ACTR8Q9H981 624 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 COPG2Q9UBF2 871 aa24.35■■□□□ 1.49
SMAD6-202ENST00000557916 CELSR3Q9NYQ7 3312 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 SRRM3A6NNA2 597 aaPredicted RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 MED26O95402 600 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 CPA3P15088 417 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 IMPDH1P20839 514 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 MAP1BP46821 2468 aaKnown RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 DCDP81605 110 aaKnown RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 PWP1Q13610 501 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 ST3GAL2Q16842 350 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 GARNL3Q5VVW2 1013 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 LCN10Q6JVE6 187 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 RPS27LQ71UM5 84 aaKnown RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 EXOC3L1Q86VI1 746 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 ARMC2Q8NEN0 867 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 TRPV3Q8NET8 790 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 PPP4R1Q8TF05 950 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 ZNF483Q8TF39 744 aaPredicted RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 KIAA1143Q96AT1 154 aaPredicted RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 MOCOSQ96EN8 888 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 TMEM237Q96Q45 408 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 SEMA4BQ9NPR2 832 aaPredicted RBP24.34■■□□□ 1.49
SMAD6-202ENST00000557916 MID2Q9UJV3 735 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 CROTQ9UKG9 612 aa24.34■■□□□ 1.49
SMAD6-202ENST00000557916 GOLGA6L10A6NI86 522 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 TCN2P20062 427 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 ITPKBP27987 946 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 CYP4F2P78329 520 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 TLE3Q04726 772 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 NDUFA9Q16795 377 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 ZNF678Q5SXM1 525 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 BROXQ5VW32 411 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 MYLK4Q86YV6 388 aaPredicted RBP24.33■■□□□ 1.49
SMAD6-202ENST00000557916 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.33■■□□□ 1.49
SMAD6-202ENST00000557916 TTLQ8NG68 377 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 TCP10LQ8TDR4 215 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 CT55Q8WUE5 264 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 FAM111AQ96PZ2 611 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 CCNL2Q96S94 520 aaPredicted RBP24.33■■□□□ 1.49
SMAD6-202ENST00000557916 GPN2Q9H9Y4 310 aaPredicted RBP24.33■■□□□ 1.49
SMAD6-202ENST00000557916 ZBTB26Q9HCK0 441 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 ZNF490Q9ULM2 529 aaPredicted RBP24.33■■□□□ 1.49
SMAD6-202ENST00000557916 SSUH2Q9Y2M2 353 aa24.33■■□□□ 1.49
SMAD6-202ENST00000557916 OR7A17O14581 309 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 TYROBPO43914 113 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 SUPT7LO94864 414 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 ATXN8OSP0DMR3 200 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 DLSTP36957 453 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 ARL1P40616 181 aaPredicted RBP24.32■■□□□ 1.48
SMAD6-202ENST00000557916 HNF4AP41235 474 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 CCNG1P51959 295 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 RGS1Q08116 209 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 SRSF6Q13247 344 aaKnown RBP24.32■■□□□ 1.48
SMAD6-202ENST00000557916 UNC50Q53HI1 259 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 LIPJQ5W064 366 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 GRHL2Q6ISB3 625 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 ARHGEF39Q8N4T4 335 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 DTWD1Q8N5C7 304 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 METTL27Q8N6F8 245 aaPredicted RBP24.32■■□□□ 1.48
SMAD6-202ENST00000557916 KCT2Q8NC54 265 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 UBE2E3Q969T4 207 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 STMN4Q9H169 189 aaPredicted RBP24.32■■□□□ 1.48
SMAD6-202ENST00000557916 ACSS2Q9NR19 701 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 SLC17A7Q9P2U7 560 aa24.32■■□□□ 1.48
SMAD6-202ENST00000557916 ANKDD1BA6NHY2 528 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 UGDHO60701 494 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 LIFP15018 202 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 GSTM2P28161 218 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 CDH13P55290 713 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 NKAIN1Q4KMZ8 207 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 TMEM214Q6NUQ4 689 aaKnown RBP24.31■■□□□ 1.48
SMAD6-202ENST00000557916 MED27Q6P2C8 311 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 HDXQ7Z353 690 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 OR52B6Q8NGF0 335 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 NT5CQ8TCD5 201 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 CREB3L4Q8TEY5 395 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 L3HYPDHQ96EM0 354 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 SEC16BQ96JE7 1060 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 EFHD1Q9BUP0 239 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 NTMT1Q9BV86 223 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 DRC3Q9H069 523 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 SSU72Q9NP77 194 aaKnown RBP24.31■■□□□ 1.48
SMAD6-202ENST00000557916 OXSMQ9NWU1 459 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 MRPS2Q9Y399 296 aaKnown RBP24.31■■□□□ 1.48
SMAD6-202ENST00000557916 ACTL7BQ9Y614 415 aa24.31■■□□□ 1.48
SMAD6-202ENST00000557916 C21orf140B9A014 251 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 CLDN9O95484 217 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 TSPAN8P19075 237 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 ITGAXP20702 1163 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 CLCQ05315 142 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 DNASE1L3Q13609 305 aa24.3■■□□□ 1.48
SMAD6-202ENST00000557916 FAM53BQ14153 422 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms