RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NAT9Q9BTE0 207 aa15.01□□□□□ -0.01
TUBB3-213ENST00000557262 SGPP1Q9BX95 441 aa15.01□□□□□ -0.01
TUBB3-213ENST00000557262 HCN3Q9P1Z3 774 aa15.01□□□□□ -0.01
TUBB3-213ENST00000557262 SH2B3Q9UQQ2 575 aa15.01□□□□□ -0.01
TUBB3-213ENST00000557262 SLC22A7Q9Y694 548 aa15.01□□□□□ -0.01
TUBB3-213ENST00000557262 CREBBPQ92793 2442 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 PRAMEF2O60811 474 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 ZG16O60844 167 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 AGTR2P50052 363 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 CDKN2DP55273 166 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 KCNK10P57789 538 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 DHX9Q08211 1270 aaKnown RBP15□□□□□ -0.01
TUBB3-213ENST00000557262 BTBD16Q32M84 506 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 RBM20Q5T481 1227 aaKnown RBP15□□□□□ -0.01
TUBB3-213ENST00000557262 H3F3CQ6NXT2 135 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 GFRALQ6UXV0 394 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 MBOAT1Q6ZNC8 495 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 KIAA0408Q6ZU52 694 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 LANCL3Q6ZV70 420 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 ANKRD37Q7Z713 158 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 SHISA5Q8N114 240 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 MFSD9Q8NBP5 474 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 HAUS8Q9BT25 410 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 ABI3Q9P2A4 366 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 MYO9AB2RTY4 2548 aa15□□□□□ -0.01
TUBB3-213ENST00000557262 OR2W5A6NFC9 320 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 DNALI1O14645 258 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-213ENST00000557262 CDH1P12830 882 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 IL10P22301 178 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 IL2P60568 153 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 PHKG1Q16816 387 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 C1QL3Q5VWW1 255 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 SP5Q6BEB4 398 aaPredicted RBP14.99□□□□□ -0.01
TUBB3-213ENST00000557262 TMEM207Q6UWW9 146 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 GALNT7Q86SF2 657 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 PDSS2Q86YH6 399 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 CNTN4Q8IWV2 1026 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 SLC35F6Q8N357 371 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 PLPP5Q8NEB5 264 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 ABHD11Q8NFV4 315 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 OR4K1Q8NGD4 311 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 ZCCHC10Q8TBK6 192 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 LINGO1Q96FE5 620 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 SNF8Q96H20 258 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 SARGQ9BW04 601 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 TRIM54Q9BYV2 358 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 ASIC3Q9UHC3 531 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 NAALAD2Q9Y3Q0 740 aa14.99□□□□□ -0.01
TUBB3-213ENST00000557262 PABPN1LA6NDY0 278 aaKnown RBP14.98□□□□□ -0.01
TUBB3-213ENST00000557262 CES2O00748 559 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 RDH16O75452 317 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 BANF1O75531 89 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 SLC35G6P0C7Q6 338 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 MST1P26927 711 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 CCR8P51685 355 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 AP1S2P56377 157 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 ACTN3Q08043 901 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-213ENST00000557262 PDAP1Q13442 181 aaKnown RBP14.98□□□□□ -0.01
TUBB3-213ENST00000557262 PWP1Q13610 501 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 HERC3Q15034 1050 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 NSDHLQ15738 373 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 EXT1Q16394 746 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 ZXDCQ2QGD7 858 aaPredicted RBP14.98□□□□□ -0.01
TUBB3-213ENST00000557262 MSS51Q4VC12 460 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 ACER2Q5QJU3 275 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 TEDDM1Q5T9Z0 273 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 IGDCC3Q8IVU1 814 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 OR56A3Q8NH54 315 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 M1APQ8TC57 530 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 PYCR2Q96C36 320 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 CERS2Q96G23 380 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 OR1F2PQ96R84 312 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 ARL15Q9NXU5 204 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 SEC14L3Q9UDX4 400 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 SNX12Q9UMY4 172 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 ENTPD4Q9Y227 616 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 VWA7Q9Y334 891 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 CROCCQ5TZA2 2017 aa14.98□□□□□ -0.01
TUBB3-213ENST00000557262 SCN3AQ9NY46 2000 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 OR1F1O43749 312 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 UNC5CO95185 931 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 TSPAN12O95859 305 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 MEP1AQ16819 746 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.97□□□□□ -0.01
TUBB3-213ENST00000557262 BBS9Q3SYG4 887 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 SFT2D3Q587I9 215 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 ZNF766Q5HY98 468 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 FCRLBQ6BAA4 426 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 TICAM1Q8IUC6 712 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 BEST3Q8N1M1 668 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 AFAP1L2Q8N4X5 818 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 TBC1D19Q8N5T2 526 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 ATL1Q8WXF7 558 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 PEX11GQ96HA9 241 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 LPAR4Q99677 370 aa14.97□□□□□ -0.01
TUBB3-213ENST00000557262 DDX47Q9H0S4 455 aaKnown RBP14.97□□□□□ -0.01
TUBB3-213ENST00000557262 MMP25Q9NPA2 562 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms