RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 CYP2A13Q16696 494 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 ATG9BQ674R7 924 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 HEATR4Q86WZ0 1026 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 SNX29P2Q8IUI4 249 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 PHF10Q8WUB8 498 aaKnown RBP14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 COG8Q96MW5 612 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 F2RL3Q96RI0 385 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 UHRF1Q96T88 793 aaPredicted RBP14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 C6orf62Q9GZU0 229 aaPredicted RBP14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 KLHL20Q9Y2M5 609 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 TPRKBQ9Y3C4 175 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 IGLON5A6NGN9 336 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 PRRT4C9JH25 899 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 GSTM1P09488 218 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 SLC35G4P0C7Q5 338 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 DBTP11182 482 aaKnown RBP14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 BMPR1AP36894 532 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 MAPK12P53778 367 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 FPGSQ05932 587 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 ZNF852Q6ZMS4 543 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 COMMD6Q7Z4G1 85 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 AMZ2Q86W34 360 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 TRAM1L1Q8N609 369 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 BPIFB1Q8TDL5 484 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 USP7Q93009 1102 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 NLNQ9BYT8 704 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 KLHL25Q9H0H3 589 aa14.78□□□□□ -0.04
TMEM55B-207ENST00000557041 SEC16AO15027 2179 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 A0A1W2PRB8 838 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 SGTAO43765 313 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 NADKO95544 446 aaPredicted RBP14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 CD247P20963 164 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 CCR3P51677 355 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 VBP1P61758 197 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 SGCGQ13326 291 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 CARTPTQ16568 116 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 ZNF773Q6PK81 442 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 TMIGD1Q6UXZ0 262 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 DCP2Q8IU60 420 aaKnown RBP14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 SETD9Q8NE22 299 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 OR14C36Q8NHC7 312 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 DTNBP1Q96EV8 351 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 SAMD11Q96NU1 681 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 FZD3Q9NPG1 666 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 ATAD3AQ9NVI7 634 aa14.77□□□□□ -0.04
TMEM55B-207ENST00000557041 BMP10O95393 424 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 TIE1P35590 1138 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 CSTF3Q12996 717 aaKnown RBP14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 SLCO6A1Q86UG4 719 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 CLIP4Q8N3C7 705 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 ZNF784Q8NCA9 323 aaPredicted RBP14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 REPS1Q96D71 796 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 RAD9AQ99638 391 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 CPPED1Q9BRF8 314 aaPredicted RBP14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 CPEB1Q9BZB8 566 aaKnown RBP14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 STOML2Q9UJZ1 356 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 SLC13A4Q9UKG4 626 aa14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 ASCC3Q8N3C0 2202 aaKnown RBP14.77□□□□□ -0.05
TMEM55B-207ENST00000557041 CYP17A1P05093 508 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 IL3P08700 152 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 HLCSP50747 726 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 RPS6KA3P51812 740 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 ZNF551Q7Z340 670 aaPredicted RBP14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 CYP4Z1Q86W10 505 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 SVOPLQ8N434 492 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 PPP1R16AQ96I34 528 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 IL4I1Q96RQ9 567 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 RHBGQ9H310 441 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 ZNF229Q9UJW7 825 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 QSOX1O00391 747 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 NME6O75414 186 aaPredicted RBP14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 SOX14O95416 240 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 C8orf89P0DMQ9 161 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 ASMTP46597 345 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 CSNK1DP48730 415 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 ST13P50502 369 aaKnown RBP14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 CDKN3Q16667 212 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 C12orf66Q96MD2 445 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 OR4K3Q96R72 315 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 EPB41L1Q9H4G0 881 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 VNN3Q9NY84 501 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 HSFX1Q9UBD0 423 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3DA0A087WVF3 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3IA0A087WXS9 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3EA0A087X179 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3KA0A087X1G2 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3FA6NER0 549 aaPredicted RBP14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3LB9A6J9 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 EFCAB14O75071 495 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 NDUFS2O75306 463 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 OLFM2O95897 454 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 CA3P07451 260 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 TBC1D3HP0C7X1 549 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 CTSKP43235 329 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 HBA1P69905 142 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 DAB2P98082 770 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 EPS8Q12929 822 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 KIAA0040Q15053 153 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 COX20Q5RI15 118 aa14.76□□□□□ -0.05
TMEM55B-207ENST00000557041 PRAMEF14Q5SWL7 426 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms