RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 LRRC57Q8N9N7 239 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 MCOLN3Q8TDD5 553 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF480Q8WV37 535 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 PRAP1Q96NZ9 151 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 LPAR4Q99677 370 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 RBCK1Q9BYM8 510 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 UCK2Q9BZX2 261 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CDCP1Q9H5V8 836 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM114A2Q9NRY5 505 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 GALPQ9UBC7 116 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 PACSIN2Q9UNF0 486 aaPredicted RBP8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 CRYL1Q9Y2S2 319 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 HRH3Q9Y5N1 445 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 DNHD1Q96M86 4753 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 HCFC1P51610 2035 aa8.49□□□□□ -1.05
HNRNPC-227ENST00000556897 MAP1AP78559 2803 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF839A8K0R7 811 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 FOXO6A8MYZ6 492 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 GOLGA8KD6RF30 607 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 GOLGA8TH3BQL2 631 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 NDC80O14777 642 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 RDH16O75452 317 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 VAPBO95292 243 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 SYF2O95926 243 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CATP04040 527 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ETS1P14921 441 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CHRM3P20309 590 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ARNTP27540 789 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 NMBRP28336 390 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 TPP2P29144 1249 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 STIP1P31948 543 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 PTGS2P35354 604 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CYLC1P35663 651 aaPredicted RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 RFC3P40938 356 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CYB561P49447 251 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 IST1P53990 364 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 TAS2R50P59544 299 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ABATP80404 500 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 TFF3Q07654 80 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 KCNJ11Q14654 390 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 USP10Q14694 798 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 THEMIS2Q5TEJ8 643 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 TMEM214Q6NUQ4 689 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 PEX26Q7Z412 305 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 PCGF5Q86SE9 256 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 RPS19BP1Q86WX3 136 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF227Q86WZ6 799 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 PDSS2Q86YH6 399 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 SPNS2Q8IVW8 549 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 REXO1L1PQ8IX06 675 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 LGI4Q8N135 537 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 KIF2BQ8N4N8 673 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 UBL4BQ8N7F7 174 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 LILRB4Q8NHJ6 448 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ZCCHC10Q8TBK6 192 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 FAM57AQ8TBR7 257 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 LPGAT1Q92604 370 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 TSLPQ969D9 159 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CALR3Q96L12 384 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 CCDC138Q96M89 665 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 OLFM1Q99784 485 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 EBNA1BP2Q99848 306 aaKnown RBP8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF559Q9BR84 538 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 LACRTQ9GZZ8 138 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ANKHQ9HCJ1 492 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF407Q9C0G0 2248 aa8.48□□□□□ -1.05
HNRNPC-227ENST00000556897 KCNE1BA0A087WTH5 132 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 ZNF860A6NHJ4 632 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 H3BMM5 538 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 TFECO14948 347 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 LIASO43766 372 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 HS6ST1O60243 411 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 CDC40O60508 579 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■■■■ 29.9
HNRNPC-227ENST00000556897 TOXO94900 526 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 ESR1P03372 595 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 MSX1P28360 303 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 CHRNB4P30926 498 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 ITGA8P53708 1063 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 SLC26A5P58743 744 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 RHAGQ02094 409 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 OASLQ15646 514 aaKnown RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 TYSND1Q2T9J0 566 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 MEI1Q5TIA1 1274 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 MRNIPQ6NTE8 343 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 CES3Q6UWW8 571 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 SDCCAG8Q86SQ7 713 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 CCDC71Q8IV32 467 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 LRRC56Q8IYG6 542 aaPredicted RBP8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 RPRMLQ8N4K4 120 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 KCT2Q8NC54 265 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 RNF214Q8ND24 703 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 PLPP5Q8NEB5 264 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 ELP5Q8TE02 316 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 ASB5Q8WWX0 329 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 RND1Q92730 232 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 TMEM125Q96AQ2 219 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 MFSD3Q96ES6 412 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 PEX11GQ96HA9 241 aa8.47□□□□□ -1.05
HNRNPC-227ENST00000556897 KCNJ16Q9NPI9 418 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms