RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 SPATA17Q96L03 361 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 HARBI1Q96MB7 349 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 CMTM3Q96MX0 182 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 FNBP1Q96RU3 617 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SH3GL2Q99962 352 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SYT15Q9BQS2 421 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 DNAI2Q9GZS0 605 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 FAM124BQ9H5Z6 455 aaPredicted RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 UPF2Q9HAU5 1272 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 BLOC1S4Q9NUP1 217 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 GDAP2Q9NXN4 497 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF224Q9NZL3 707 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 DEC1Q9P2X7 70 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SIX4Q9UIU6 781 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 CDH9Q9ULB4 789 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 SMC3Q9UQE7 1217 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 CLIC4Q9Y696 253 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 STYXL1Q9Y6J8 313 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF292O60281 2723 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 ATP8B3O60423 1300 aa4.89□□□□□ -1.63
HIF1A-209ENST00000556827 TDRD15B5MCY1 1934 aaKnown RBP4.89□□□□□ -1.63
HIF1A-209ENST00000556827 EP300Q09472 2414 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SAA2-SAA4A0A096LPE2 208 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 A0A0G2JPF8 293 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 TCRBV21S2A2A0A5A6 115 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF233A6NK53 670 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 HNRNPCL2B2RXH8 293 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 HNRNPCL3B7ZW38 293 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF587BE7ETH6 402 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 F5H0A9 414 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 K7EQS6 105 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 PTP4A3O75365 173 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SERPINF2P08697 491 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 HNRNPCL4P0DMR1 293 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 MBL2P11226 248 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ACADMP11310 421 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 DDX5P17844 614 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 BDNFP23560 247 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 GJB2P29033 226 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 GNL1P36915 607 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 HADHAP40939 763 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 P2RY2P41231 377 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 RAD23BP54727 409 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 TNNC1P63316 161 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CSNK2A1P68400 391 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 NOP14P78316 857 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SLC7A9P82251 487 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CDC16Q13042 620 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 E2F5Q15329 346 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 KCNT1Q5JUK3 1230 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 LCE1EQ5T753 118 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SLC39A4Q6P5W5 647 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CCNI2Q6ZMN8 369 aaPredicted RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CCDC73Q6ZRK6 1079 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SFR1Q86XK3 245 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CCDC65Q8IXS2 484 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 GPD1LQ8N335 351 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ALLCQ8N6M5 410 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CSNK2A3Q8NEV1 391 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SPATA20Q8TB22 786 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 LRRC15Q8TF66 581 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SLC20A1Q8WUM9 679 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 RLN3Q8WXF3 142 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 FBXO32Q969P5 355 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 TMEM19Q96HH6 336 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 SLC22A12Q96S37 553 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 MTERF1Q99551 399 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 MTMR12Q9C0I1 747 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ELOVL4Q9GZR5 314 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 PIGMQ9H3S5 423 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 DDX31Q9H8H2 851 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 EIF2B3Q9NR50 452 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 TBC1D7Q9P0N9 293 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 COPG2Q9UBF2 871 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 RALYQ9UKM9 306 aaKnown RBP4.88□□□□□ -1.63
HIF1A-209ENST00000556827 LOXL2Q9Y4K0 774 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 CPQQ9Y646 472 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 ITIH6Q6UXX5 1313 aa4.88□□□□□ -1.63
HIF1A-209ENST00000556827 MYH15Q9Y2K3 1946 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 A0A087WYN8 130 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 SPAARA0A1B0GVQ0 90 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 FRMD3A2A2Y4 597 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 GOLGA8IPA6NC78 632 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 ZNF840PA6NDX5 716 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 GOLGA8JA6NMD2 632 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 CYSRT1A8MQ03 144 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 A8MXQ7 604 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 F8VP50 259 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 CDX4O14627 284 aaPredicted RBP4.87□□□□□ -1.63
HIF1A-209ENST00000556827 CLGNO14967 610 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 SLC16A5O15375 505 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 DOK2O60496 412 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 JRKO75564 520 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 TNNI1P19237 187 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 BCKDHBP21953 392 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 ADSSP30520 456 aa4.87□□□□□ -1.63
HIF1A-209ENST00000556827 CORO1AP31146 461 aaKnown RBP4.87□□□□□ -1.63
HIF1A-209ENST00000556827 HOXC13P31276 330 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms