RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 PPP1R32Q7Z5V6 425 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PAQR7Q86WK9 346 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PRSS58Q8IYP2 241 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ZBED8Q8IZ13 594 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 IQCKQ8N0W5 287 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 AGGF1Q8N302 714 aaeCLIP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 NKAPQ8N5F7 415 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PYROXD1Q8WU10 500 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 METTL21AQ8WXB1 218 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 OR2A5Q96R48 311 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 EPS8L2Q9H6S3 715 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 SLC6A20Q9NP91 592 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 MKKSQ9NPJ1 570 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 SLC22A11Q9NSA0 550 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 C14orf105Q9NVL8 296 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 STOX2Q9P2F5 926 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 CTSFQ9UBX1 484 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 FBXL4Q9UKA2 621 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PDE10AQ9Y233 779 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PLAAQ9Y263 795 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 RUVBL1Q9Y265 456 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 MED16Q9Y2X0 877 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 TEX264Q9Y6I9 313 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 LRRK2Q5S007 2527 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF106Q9H2Y7 1883 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 KCNE1BA0A087WTH5 132 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 A0A096LPE4 126 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 NSG1A0A0A6YYJ2 146 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 A0A1W2PPZ6 126 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 VSTM2BA6NLU5 285 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 H0YIG0 161 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 BANF1O75531 89 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 F7P08709 466 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 FAM157BP0CG42 384 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 MASP1P48740 699 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 CCR8P51685 355 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 CDKN2DP55273 166 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 TBPL1P62380 186 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 YBX1P67809 324 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 UBAP2LQ14157 1087 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 FRG1Q14331 258 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 CSHL1Q14406 222 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 INPP5JQ15735 1006 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 HKDC1Q2TB90 917 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PRTGQ2VWP7 1150 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 COLEC12Q5KU26 742 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 MFSD4BQ5TF39 518 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 DUPD1Q68J44 220 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ZNF425Q6IV72 752 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 NIPAL1Q6NVV3 410 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 KIRREL2Q6UWL6 708 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 IGFL3Q6UXB1 125 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 STRA8Q7Z7C7 330 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 SLC26A11Q86WA9 606 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 GALNT11Q8NCW6 608 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 FBXO36Q8NEA4 188 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 SLC13A3Q8WWT9 602 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 PDLIM5Q96HC4 596 aaKnown RBP6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ERP44Q9BS26 406 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 LHPPQ9H008 270 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 ATG10Q9H0Y0 220 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 SNX24Q9Y343 169 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 DYRK1BQ9Y463 629 aa6.97□□□□□ -1.29
SCFD1-222ENST00000556768 A0A0A6YYC8 382 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 IGKV1-8A0A0C4DH67 115 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 DYTNA2CJ06 578 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FAM187AA6NFU0 413 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 URADA6NGE7 173 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 IDSB3KWA1 339 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 I3L1I5 382 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 HAT1O14929 419 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 CNOT3O75175 753 aaKnown RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 GUCA1CO95843 209 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FDXRP22570 491 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 GABRB3P28472 473 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 SLC26A3P40879 764 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 CD97P48960 835 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 HNMTP50135 292 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 CAV1Q03135 178 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FXNQ16595 210 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 VWA2Q5GFL6 755 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 RBM20Q5T481 1227 aaKnown RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FBXW10Q5XX13 1052 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 SLC6A19Q695T7 634 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FRA10AC1Q70Z53 315 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 NDUFAF7Q7L592 441 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 PLD3Q8IV08 490 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 IGDCC3Q8IVU1 814 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 KBTBD2Q8IY47 623 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 FAM26EQ8N5C1 309 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 SPATA4Q8NEY3 305 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 OR11G2Q8NGC1 345 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 DNAJB14Q8TBM8 379 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 ANKRD7Q92527 254 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 MIB2Q96AX9 1013 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 TSPAN17Q96FV3 270 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 THOC3Q96J01 351 aaKnown RBP6.96□□□□□ -1.3
SCFD1-222ENST00000556768 EGFL8Q99944 293 aa6.96□□□□□ -1.3
SCFD1-222ENST00000556768 TRIM51Q9BSJ1 452 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms