RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 INHBEP58166 350 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 ZNF630Q2M218 657 aaPredicted RBP14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 EXOC3L2Q2M3D2 409 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 PIGXQ8TBF5 258 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 ADAMTS15Q8TE58 950 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 SUSD6Q92537 303 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 NARS2Q96I59 477 aaKnown RBP14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 GPR78Q96P69 363 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 FERD3LQ96RJ6 166 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 INPP5KQ9BT40 448 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 KCNN2Q9H2S1 579 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 GPR83Q9NYM4 423 aa14.55□□□□□ -0.08
ARHGEF40-207ENST00000556399 UBE2QL1A1L167 161 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 TLX2O43763 284 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 TSPAN9O75954 239 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 CSTF1Q05048 431 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 SLC35G5Q96KT7 338 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 EFCAB11Q9BUY7 163 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 SEC14L4Q9UDX3 406 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 LOXHD1Q8IVV2 1947 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 FAM86C2PA6NEL3 165 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 UPK1BO75841 260 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PTTG1O95997 202 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 RPS13P62277 151 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PPIGQ13427 754 aaKnown RBP eCLIP14.54□□□□□ -0.084e-7■■■□□ 14.9
ARHGEF40-207ENST00000556399 SUZ12Q15022 739 aaKnown RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 AGTRAPQ6RW13 159 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 MAMDC4Q6UXC1 1216 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 TPRG1Q6ZUI0 275 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 NPAS4Q8IUM7 802 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 MFSD6LQ8IWD5 586 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 FEVQ99581 238 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 C11orf84Q9BUA3 381 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 OR2B2Q9GZK3 357 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 SMURF1Q9HCE7 757 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 DIABLOQ9NR28 239 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 TAS2R9Q9NYW1 312 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 CKMT1AP12532 417 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 TLX1P31314 330 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 BDKRB1P46663 353 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 FAM189BP81408 668 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 CEACAM20Q6UY09 585 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 RNF130Q86XS8 419 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PIANPQ8IYJ0 282 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 C3orf58Q8NDZ4 430 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 CCDC3Q9BQI4 270 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 CARD8Q9Y2G2 431 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PRMT3O60678 531 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 PNCKQ6P2M8 343 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 SLCO4A1Q96BD0 722 aa14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 ZBED6CLQ96FA7 236 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 ZBTB20Q9HC78 741 aaPredicted RBP14.54□□□□□ -0.08
ARHGEF40-207ENST00000556399 DLGAP1O14490 977 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 GJB5O95377 273 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ACRV1P26436 265 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 HTR1BP28222 390 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SEMA3BQ13214 749 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PROX2Q3B8N5 592 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SLC7A5P1Q8MH63 180 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 BEND7Q8N7W2 519 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TCEANCQ8N8B7 351 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 FAM110BQ8TC76 370 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TRIB3Q96RU7 358 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TMEM246Q9BRR3 403 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ZNF224Q9NZL3 707 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PCDHB11Q9Y5F2 797 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SOCS7O14512 581 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 GSTT2P0CG29 244 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 GSTT2BP0CG30 244 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 RYKP34925 604 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 KEAP1Q14145 624 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ZNF691Q5VV52 312 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ALKAL1Q6UXT8 129 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 MAT2BQ9NZL9 334 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 ABCD2Q9UBJ2 740 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SLC45A1Q9Y2W3 748 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PRKAB1Q9Y478 270 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 GOLGA4Q13439 2230 aaKnown RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 LOC285095A0A1B0GVY8 99 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PIK3CBP42338 1070 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 HNRNPA0Q13151 305 aaKnown RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 CLEC12AQ5QGZ9 265 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 KIAA0319Q5VV43 1072 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 MARCH9Q86YJ5 346 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 DBF4BQ8NFT6 615 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 EFHD2Q96C19 240 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 BOCQ9BWV1 1114 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TMEM138Q9NPI0 162 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PAK6Q9NQU5 681 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TBC1D14Q9P2M4 693 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 PHF11Q9UIL8 331 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 SLC9A3R1O14745 358 aaPredicted RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 RPL4P36578 427 aaKnown RBP14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 KCNC1P48547 511 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 TAS2R50P59544 299 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 CARD16Q5EG05 197 aa14.53□□□□□ -0.08
ARHGEF40-207ENST00000556399 GPRC6AQ5T6X5 926 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms