RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 ATG10Q9H0Y0 220 aa18.63■□□□□ 0.57
PRKCH-219ENST00000555906 MYO7BQ6PIF6 2116 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 FEZF1A0PJY2 475 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 SGK494L7N484 410 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 PRAMEF2O60811 474 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 RASAL1O95294 804 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 CRYABP02511 175 aaKnown RBP18.62■□□□□ 0.57
PRKCH-219ENST00000555906 MYBL2P10244 700 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 GABRB3P28472 473 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 KCNK10P57789 538 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 NAE1Q13564 534 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 BTBD16Q32M84 506 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 C1QL3Q5VWW1 255 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 CAPN13Q6MZZ7 669 aaPredicted RBP18.62■□□□□ 0.57
PRKCH-219ENST00000555906 PAQR3Q6TCH7 311 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 ANKRD37Q7Z713 158 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 FJX1Q86VR8 437 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 PDSS2Q86YH6 399 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 MFSD9Q8NBP5 474 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 KCT2Q8NC54 265 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 DNAJB8Q8NHS0 232 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 SLCO2A1Q92959 643 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 RELTQ969Z4 430 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 CERS2Q96G23 380 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 MACROD1Q9BQ69 325 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 HAUS8Q9BT25 410 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 SARGQ9BW04 601 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 ASIC3Q9UHC3 531 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 CORO1CQ9ULV4 474 aaPredicted RBP18.62■□□□□ 0.57
PRKCH-219ENST00000555906 SLC22A7Q9Y694 548 aa18.62■□□□□ 0.57
PRKCH-219ENST00000555906 IGHV3-20A0A0C4DH32 117 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 PABPN1LA6NDY0 278 aaKnown RBP18.61■□□□□ 0.57
PRKCH-219ENST00000555906 RDH16O75452 317 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 TSPAN12O95859 305 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 HIST1H2AGP0C0S8 130 aaPredicted RBP18.61■□□□□ 0.57
PRKCH-219ENST00000555906 HIST1H2ADP20671 130 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 IL10P22301 178 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 AP1S2P56377 157 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 EXT1Q16394 746 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 H3F3CQ6NXT2 135 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 GFRALQ6UXV0 394 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 SLC26A11Q86WA9 606 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 SHISA5Q8N114 240 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 SLC35F6Q8N357 371 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 ABHD11Q8NFV4 315 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 SLC13A3Q8WWT9 602 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 HIST1H2AHQ96KK5 128 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 OR1F2PQ96R84 312 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 HIST1H2AJQ99878 128 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 H2AFJQ9BTM1 129 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 SNX12Q9UMY4 172 aa18.61■□□□□ 0.57
PRKCH-219ENST00000555906 LCMT2O60294 686 aaKnown RBP18.6■□□□□ 0.57
PRKCH-219ENST00000555906 BANF1O75531 89 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 NPPBP16860 134 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 CCR8P51685 355 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 IL2P60568 153 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 HERC3Q15034 1050 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 MSS51Q4VC12 460 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 DUPD1Q68J44 220 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 AFAP1L2Q8N4X5 818 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 AMER2Q8N7J2 671 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 OR56A3Q8NH54 315 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 ALKBH8Q96BT7 664 aaKnown RBP18.6■□□□□ 0.57
PRKCH-219ENST00000555906 ZNF354BQ96LW1 612 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 ARL15Q9NXU5 204 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 STMN3Q9NZ72 180 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 ENTPD4Q9Y227 616 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 NAALAD2Q9Y3Q0 740 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 PCDHGB6Q9Y5F9 930 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 CSMD1Q96PZ7 3565 aa18.6■□□□□ 0.57
PRKCH-219ENST00000555906 NDUFS4O43181 175 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 AHSGP02765 367 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 ENO2P09104 434 aaPredicted RBP18.59■□□□□ 0.57
PRKCH-219ENST00000555906 MST1P26927 711 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 SKP1P63208 163 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 RHAGQ02094 409 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 PDAP1Q13442 181 aaKnown RBP18.59■□□□□ 0.57
PRKCH-219ENST00000555906 PWP1Q13610 501 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 ZXDCQ2QGD7 858 aaPredicted RBP18.59■□□□□ 0.57
PRKCH-219ENST00000555906 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.59■□□□□ 0.57
PRKCH-219ENST00000555906 ACER2Q5QJU3 275 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 BEST3Q8N1M1 668 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 OR4K1Q8NGD4 311 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 M1APQ8TC57 530 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 RBCK1Q9BYM8 510 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 DDX47Q9H0S4 455 aaKnown RBP18.59■□□□□ 0.57
PRKCH-219ENST00000555906 MMP25Q9NPA2 562 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 LANCL2Q9NS86 450 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 SLC17A6Q9P2U8 582 aa18.59■□□□□ 0.57
PRKCH-219ENST00000555906 TRBC2A0A5B9 178 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 ZNF860A6NHJ4 632 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 MAGEB17A8MXT2 336 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 UNC5CO95185 931 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 ABRAXAS2Q15018 415 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 BBS9Q3SYG4 887 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 ZNF766Q5HY98 468 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 FAM45BPQ6NSW5 357 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 NIPAL1Q6NVV3 410 aa18.58■□□□□ 0.56
PRKCH-219ENST00000555906 PAPD4Q6PIY7 484 aaKnown RBP18.58■□□□□ 0.56
PRKCH-219ENST00000555906 STRA8Q7Z7C7 330 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms