RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 MEGF10Q96KG7 1140 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CYTH2Q99418 400 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 KCNJ16Q9NPI9 418 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 RASSF1Q9NS23 344 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.54□□□□□ -1.04
PRKCH-218ENST00000555628 IMPACTQ9P2X3 320 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 FEZ2Q9UHY8 353 aaPredicted RBP8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CAPN11Q9UMQ6 739 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 CDC14AQ9UNH5 594 aa8.54□□□□□ -1.04
PRKCH-218ENST00000555628 A0A0A6YYC8 382 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 FAM237BA0A1B0GVD1 139 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 OR2W5A6NFC9 320 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 A8MUI8 341 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 I3L1I5 382 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 PRPF4O43172 522 aaKnown RBP eCLIP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SLC25A12O75746 678 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 ZWINTO95229 277 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 ATE1O95260 518 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 C1orf105O95561 183 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 EIF2S1P05198 315 aaKnown RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 HEXAP06865 529 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 AOAHP28039 575 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 PTGS2P35354 604 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 MARCKSL1P49006 195 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 MEOX1P50221 254 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 NUP107P57740 925 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 MYBPHQ13203 477 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 FAM53BQ14153 422 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SPARCL1Q14515 664 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 TCEAL1Q15170 157 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SLC18A3Q16572 532 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SYTL3Q4VX76 610 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 ANKRD20A2Q5SQ80 823 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 ANKRD20A1Q5TYW2 823 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 ANKRD20A3Q5VUR7 823 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SLC25A25Q6KCM7 469 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 LRRC8BQ6P9F7 803 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 PAMR1Q6UXH9 720 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 CLEC17AQ6ZS10 378 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 BBS12Q6ZW61 710 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 TAS2R42Q7RTR8 314 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 PRSS41Q7RTY9 318 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 AGGF1Q8N302 714 aaeCLIP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 OR13J1Q8NGT2 312 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 C16orf52Q8NHV5 167 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 M1APQ8TC57 530 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 CTNNBL1Q8WYA6 563 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 P3H4Q92791 437 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 MMABQ96EY8 250 aaPredicted RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 CABS1Q96KC9 395 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 C18orf12Q96KH6 178 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 TBL1YQ9BQ87 522 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 BPIFA3Q9BQP9 254 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 PLCD4Q9BRC7 762 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 GPATCH1Q9BRR8 931 aaKnown RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 DPH7Q9BTV6 452 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 RAB11FIP5Q9BXF6 653 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 DRC3Q9H069 523 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 DDX56Q9NY93 547 aaKnown RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 LRFN1Q9P244 771 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 AAR2Q9Y312 384 aaKnown RBP8.53□□□□□ -1.04
PRKCH-218ENST00000555628 HYOU1Q9Y4L1 999 aa8.53□□□□□ -1.04
PRKCH-218ENST00000555628 SONP18583 2426 aaKnown RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 CCDC162PA2VCL2 907 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 IQCF5A8MTL0 148 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 ARHGEF33A8MVX0 844 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 F8W735 103 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 APOC4-APOC2K7ER74 178 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 DYRK3O43781 588 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 PHF2O75151 1096 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 APOC2P02655 101 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 RPN2P04844 631 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 UQCRHP07919 91 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 INHBBP09529 407 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 OR56A5P0C7T3 313 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 TFEBP19484 476 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 MSNP26038 577 aaKnown RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 TRHRP34981 398 aaPredicted RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 BDKRB1P46663 353 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 CSE1LP55060 971 aaKnown RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 RHAGQ02094 409 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 RELAQ04206 551 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 ACVR1Q04771 509 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 GBX1Q14549 363 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 SEMA3AQ14563 771 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 NFKBIBQ15653 356 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 EXT1Q16394 746 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 ITPRIPL1Q6GPH6 555 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 TMEM211Q6ICI0 200 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 ZNF534Q76KX8 674 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 CDC20BQ86Y33 519 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 LIX1LQ8IVB5 337 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 POGLUT1Q8NBL1 392 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 STYXQ8WUJ0 223 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 RND1Q92730 232 aa8.52□□□□□ -1.05
PRKCH-218ENST00000555628 POLDIP3Q9BY77 421 aaKnown RBP8.52□□□□□ -1.05
PRKCH-218ENST00000555628 CLEC4MQ9H2X3 399 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms