RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 KHDRBS3O75525 346 aaKnown RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 RAF1P04049 648 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 PATE4P0C8F1 98 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 DLATP10515 647 aaKnown RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 CEACAM1P13688 526 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 VCLP18206 1134 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 ELAVL4P26378 380 aaKnown RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 RBMS1P29558 406 aaKnown RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 CTNNB1P35222 781 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 KIAA1024LP59773 190 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 ABRQ12979 859 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 PTPN14Q15678 1187 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 ARMCX4Q5H9R4 360 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 C9orf50Q5SZB4 431 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 LEKR1Q6ZMV7 388 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 CARNMT1Q8N4J0 409 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 FAM76AQ8TAV0 307 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 ARHGAP45Q92619 1136 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 AP2M1Q96CW1 435 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 ZNF501Q96CX3 271 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 RASL10BQ96S79 203 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 FSD1Q9BTV5 496 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 FUCA2Q9BTY2 467 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 NYXQ9GZU5 481 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 P2RY12Q9H244 342 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 EGLN3Q9H6Z9 239 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 AKIRIN1Q9H9L7 192 aaPredicted RBP4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 MAN2C1Q9NTJ4 1040 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 PANK4Q9NVE7 773 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 SPG21Q9NZD8 308 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 FBXL4Q9UKA2 621 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 PILRBQ9UKJ0 227 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 NSG2Q9Y328 171 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 SELENOKQ9Y6D0 94 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 COLEC10Q9Y6Z7 277 aa4.78□□□□□ -1.64
CKS1BP1-201ENST00000555221 NPHP3Q7Z494 1330 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 TRIM64A6NGJ6 449 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 TRIM64BA6NI03 449 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 HHLA1C9JL84 531 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 H3BMM5 538 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 PGRMC2O15173 223 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 SP1P08047 785 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 GNB3P16520 340 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 RPL35AP18077 110 aaKnown RBP4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 ITGB6P18564 788 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 DCDC1P59894 354 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 RPP38P78345 283 aaKnown RBP4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 SLC39A12Q504Y0 691 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 ZNF542PQ5EBM4 170 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 PM20D1Q6GTS8 502 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 MACC1Q6ZN28 852 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 LACC1Q8IV20 430 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 LPCAT1Q8NF37 534 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 GATAD1Q8WUU5 269 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 KRT35Q92764 455 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 LGALS12Q96DT0 336 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 CABS1Q96KC9 395 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 DUX3Q96PT4 197 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 PANX3Q96QZ0 392 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 TDRD1Q9BXT4 1180 aaKnown RBP4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 CUEDC2Q9H467 287 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 MID1IP1Q9NPA3 183 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 FBXW2Q9UKT8 454 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 WDR37Q9Y2I8 494 aa4.77□□□□□ -1.65
CKS1BP1-201ENST00000555221 DDX39AO00148 427 aaKnown RBP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 KINO60870 393 aaKnown RBP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 NME6O75414 186 aaPredicted RBP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 GRAP2O75791 330 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 PNPP00491 289 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 CEBPBP17676 345 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 AADACP22760 399 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 SERPINB6P35237 376 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 ARF5P84085 180 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 SLC34A1Q06495 639 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 C17orf67Q0P5P2 114 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 SRSF9Q13242 221 aaKnown RBP eCLIP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 ACKR1Q16570 336 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 KLHL22Q53GT1 634 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 AGAP6Q5VW22 663 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 TMEM99Q8N816 258 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 DDHD1Q8NEL9 900 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 MRGPRDQ8TDS7 321 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 DNASE2BQ8WZ79 361 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 PDLIM5Q96HC4 596 aaKnown RBP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 LRR1Q96L50 414 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 PRMT1Q99873 361 aaKnown RBP4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 PI4K2AQ9BTU6 479 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 NAPBQ9H115 298 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 HACD3Q9P035 362 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 NCKAP1Q9Y2A7 1128 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 PCDHGA1Q9Y5H4 931 aa4.76□□□□□ -1.65
CKS1BP1-201ENST00000555221 TRBV4-1A0A0J9YWV2 114 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 C2orf92A0A1B0GVN3 265 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 SMIM30A4D0T7 59 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 MTMR11A4FU01 709 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ANTXRLA6NF34 631 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ANKDD1BA6NHY2 528 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 A8MVM7 634 aa4.75□□□□□ -1.65
CKS1BP1-201ENST00000555221 ACSL4O60488 711 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms