RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 TTC7AQ9ULT0 858 aaPredicted RBP4.89□□□□□ -1.63
VRK1-203ENST00000555067 SNX6Q9UNH7 406 aa4.89□□□□□ -1.63
VRK1-203ENST00000555067 NEMP2A6NFY4 417 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 ANKDD1BA6NHY2 528 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 C2orf81A6NN90 581 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 PLK4O00444 970 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 CASQ2O14958 399 aaPredicted RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 MAGEB2O15479 319 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 ZG16O60844 167 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 CXCL10P02778 98 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 CYP2A7P20853 494 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 HNRNPA2B1P22626 353 aaKnown RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 MARK3P27448 753 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 TMOD1P28289 359 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 CASQ1P31415 396 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 APOBEC1P41238 236 aaKnown RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 MTTPP55157 894 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 PPP1R8Q12972 351 aaKnown RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 MAD2L1Q13257 205 aaPredicted RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 CUL2Q13617 745 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 MCMDC2Q4G0Z9 681 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 PAPPA-AS1Q5QFB9 102 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 LDLRAP1Q5SW96 308 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 STXBP5Q5T5C0 1151 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SULT1C3Q6IMI6 304 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 BTNL8Q6UX41 500 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SLC26A9Q7LBE3 791 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 TMPRSS11BQ86T26 416 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 CDH26Q8IXH8 852 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 ZCCHC7Q8N3Z6 543 aaKnown RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 EMC1Q8N766 993 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SLC38A9Q8NBW4 561 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 PAPD5Q8NDF8 572 aaKnown RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 OR13A1Q8NGR1 328 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SYN2Q92777 582 aaPredicted RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 RHBDF1Q96CC6 855 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 MYADMQ96S97 322 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 FAM213AQ9BRX8 229 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 EGLN1Q9GZT9 426 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 TSPYL1Q9H0U9 437 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SNX25Q9H3E2 840 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 LRRC4Q9HBW1 653 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 SMPD3Q9NY59 655 aaPredicted RBP4.88□□□□□ -1.63
VRK1-203ENST00000555067 NDUFA13Q9P0J0 144 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 TMED5Q9Y3A6 229 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 NCAPD2Q15021 1401 aa4.88□□□□□ -1.63
VRK1-203ENST00000555067 A0A1W2PPK0 400 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 ILVBLA1L0T0 632 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TRIM49BA6NDI0 452 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 ERICH4A6NGS2 130 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CXCL11O14625 94 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 MAGEB3O15480 346 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 MTX2O75431 263 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 KRT8P05787 483 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CCDC159P0C7I6 412 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 SAGP10523 405 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 THRBP10828 461 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CCNCP24863 283 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CYP2F1P24903 491 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 HSD17B3P37058 310 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TNNT2P45379 298 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 IER3P46695 156 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CDX1P47902 265 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 SLC6A12P48065 614 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 SLC9A3P48764 834 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 UBE2HP62256 183 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CSNK2A1P68400 391 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 PITX1P78337 314 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 IL24Q13007 206 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 IFT88Q13099 833 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 DCST1Q5T197 706 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CCNYL2Q5T2Q4 361 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 ATAD3BQ5T9A4 648 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 PRAMEF7Q5VXH5 474 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 DUS1LQ6P1R4 473 aaKnown RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 DLEU7Q6UYE1 221 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 B3GNT6Q6ZMB0 384 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TMPRSS11FQ6ZWK6 438 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 VASH2Q86V25 355 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 ANKRD46Q86W74 232 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 NRROSQ86YC3 692 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TMEM126BQ8IUX1 230 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 METTL27Q8N6F8 245 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 CSNK2A3Q8NEV1 391 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 VANGL1Q8TAA9 524 aaPredicted RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 SLCO4A1Q96BD0 722 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 LINGO1Q96FE5 620 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TTC25Q96NG3 672 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 RAD9AQ99638 391 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 SSX3Q99909 188 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 DDX50Q9BQ39 737 aaKnown RBP4.87□□□□□ -1.63
VRK1-203ENST00000555067 KXD1Q9BQD3 176 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 ZSCAN5AQ9BUG6 496 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TMEM117Q9H0C3 514 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 TMEM245Q9H330 911 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 CUEDC2Q9H467 287 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 RMND5AQ9H871 391 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 PCDH9Q9HC56 1237 aa4.87□□□□□ -1.63
VRK1-203ENST00000555067 Q9N2K0 584 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms